ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_30940_4

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: comp(3899..5245)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JST9_BURVG similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 386.0
  • Bit_score: 309
  • Evalue 3.40e-81
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 454.0
  • Bit_score: 408
  • Evalue 2.00e-111
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 394.0
  • Bit_score: 536
  • Evalue 2.40e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1347
ATGACCGCCGCGCCGGTGTTGGCCGTGGTGATGCTCTCCGACTCGTTCTCGTCGGTGTGGTCCGACGTCGCCCAGGAGCTGGGCGCCACGGTGGCGCCGCTCGCCCCGGGCGACGACCCGTCGAGCGGGACCGTGGCGGTGGTGGTGGCCGCGGGCGGCGAGGAGGAGCGGGCGCTGGACGCGCTGCCGGCGCTCGCGGCCCGGCTCCCGGTGCCGCTCTTCCTGGTGGGGGCGCGGCCCTCGCACCGGTTCGCGGTCGAGGCGGTGCGCCGGGGCGCGGCCGACTATTTCGTGCTCCCCGGCGACCTCGACCTGTTTCGCCGCACGCTGGCCGCCCGGCTCGAGGCCGAGCGGGGCCGCGCCCGCCGGTCGGGCGAGCACCGGCTCGATCCGTTCGTCGAGCTGGTGGGCGAGAGTCCCGCCCTGCGCGCCACCATCGAGAAGGCGAGCCGGGTGCTGGCCCACAAGGACGTCACCGTCCTGGTGGGTGGCGAGACCGGCACCGGCAAGGAGCTGCTGGCCCGCGCCCTCCACGTGGGCGGCCCGCGGGCCGGGGGTCCGTTCGTGGCGGTCAACTGCGCCGCCATTCCCGGGCAGCTGCTCGAGAGCGAGCTGTTCGGCCACGAGCGCGGCGCCTTCACCGATGCCCACCGCGCCAAGGCCGGCCTGTTCGAGGAAGCGGACGGCGGCACGCTGTTTCTGGACGAGATCGGTCACCTGCCGCTGGCGCTCCAGGGAAAGCTGCTCCGGGCGCTCGACGAGCGGCGGGTGCGCCGGGTGGGCGCCACGCAGTCGCGCGCGTTCGACGCCCGCATCATCGCCGCCACCCACGTGGATCTCGCCATGGCCGTGCGCCGGGGCGAGTTCCGCGAAGACCTGTTCTACCGCCTGAACGTGGTGCACCTGGTACTCCCGCCGCTCCGCGAGCGCGGCGAAGACGTCATCGTGCTGGCGGGCACGTTCGCGACCGCGCTGGCGCGACGCTACGGCCTCCCCGAGCCCCGGATCACGCCGGACGTGCGGGCGGCGCTGCTGCGGCACACCTGGCCCGGCAACGTGCGCGAGCTGCGTCATGCGATGGAGCGCGCGCTGCTGTTGTCGCCCCCCGGCACGCTCGACGCCCAGGAGTTGACCCCGGCGGCGGCCGCCCCGGCCGCCTCCGCGGGTTCCGCCGTTCTGCCGTTCCCCGCTCCGCTCTCCGCCATCACCCAGGCGGCCGCGCGCGCCGCGGTGGACCTGCACGCCGGCAACAAGAGCGCCGCCGCGCGACAGCTCGGCATCTCGCGCTCCCGGCTGCAGCGGCTGCTGGACCGCACCGACGACGGGACGGAGGACGGCGATGAATGA
PROTEIN sequence
Length: 449
MTAAPVLAVVMLSDSFSSVWSDVAQELGATVAPLAPGDDPSSGTVAVVVAAGGEEERALDALPALAARLPVPLFLVGARPSHRFAVEAVRRGAADYFVLPGDLDLFRRTLAARLEAERGRARRSGEHRLDPFVELVGESPALRATIEKASRVLAHKDVTVLVGGETGTGKELLARALHVGGPRAGGPFVAVNCAAIPGQLLESELFGHERGAFTDAHRAKAGLFEEADGGTLFLDEIGHLPLALQGKLLRALDERRVRRVGATQSRAFDARIIAATHVDLAMAVRRGEFREDLFYRLNVVHLVLPPLRERGEDVIVLAGTFATALARRYGLPEPRITPDVRAALLRHTWPGNVRELRHAMERALLLSPPGTLDAQELTPAAAAPAASAGSAVLPFPAPLSAITQAAARAAVDLHAGNKSAAARQLGISRSRLQRLLDRTDDGTEDGDE*