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PLM4_65_b1_redo_sep16_scaffold_3978_2

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 557..1072

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 170.0
  • Bit_score: 256
  • Evalue 2.40e-65
Peptide deformylase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 166.0
  • Bit_score: 193
  • Evalue 1.00e-46
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 166.0
  • Bit_score: 193
  • Evalue 2.90e-47

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGCATTAATGGAAATCGTAAAGTGGCCGCATCCGATTCTTGATGCGCCAGGTGATCCGGTCACGGAGTTTGGCGAGGGCCTGAAAAAACTCATCAGCGACATGTTTGAGACGATGTATTCGGCGCCTGGCGTGGGTCTGGCGGCGGTGCAGGTCGGTGTGGCCAGGCGGCTCTTTGTGATGGACTGCTCCGGCGGGAAAGATCCCGACCAGCGCGTGGTGATGATCAATCCGGAGGTTATTCACGTTGAAGGTGAACAGAACGGCGAAGAGGGCTGTCTTTCGTTTCCGGGAGTGTTTACGCCGGTCGAGCGTAGCCTGCGGGCAATCGTGCGCGCTCACGACATAAATGGAAATCAGTTTGAACTCGACGATACGGAACTTACTGCCCGCTGTATGCTGCACGAAACCGATCATTGCGATGGCATCGTGTTTCTGGACAAGATGAGTCCCCTCAAACGTGAGTTGGTGAAACGCAAAATCAGGAAACTGCAAAAAGCGGGTAAGTGGGAGTGA
PROTEIN sequence
Length: 172
MALMEIVKWPHPILDAPGDPVTEFGEGLKKLISDMFETMYSAPGVGLAAVQVGVARRLFVMDCSGGKDPDQRVVMINPEVIHVEGEQNGEEGCLSFPGVFTPVERSLRAIVRAHDINGNQFELDDTELTARCMLHETDHCDGIVFLDKMSPLKRELVKRKIRKLQKAGKWE*