ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_7405_6

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(7901..9268)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB0_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 459.0
  • Bit_score: 493
  • Evalue 1.70e-136
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM64577.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 455.0
  • Bit_score: 647
  • Evalue 1.30e-182
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 459.0
  • Bit_score: 493
  • Evalue 4.70e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGCCAGACATCCTACTTGTTGAAGACAAAGACAGCTTACGCCGCGTTTTACGTTTGACTCTGGAGAATGCAGGCTACACTGTCACCGAAGCAGCCGATGGGCGCGCGGCTTTGAATGAAGTAGCCGGCGGTCCCCACAAGTTAGTCCTCACCGACCTACGTATGCCAAATGGTTCCGGCCTCGATGTTTTACGTGCGGCACGGGCTGCAGATGGAAATATTCCTGTCATCGTCATGACTGCCTTCGGTTCGATCGATGAAGCAGTGCAAGCCATGAAGGATGGCGCTCATGATTTTTTGCAAAAGCCGGTCGACTCCAATCATCTCCTTCTGATCGTCGAGCGCGCGCTCGCGCAGGAAAGATTACGAACTGAAAACATACTGTTAAAGGAAGAATGGTCGCGGCGCTATGGGTTCCCGCGGATCATCGGAGAATCGGTAGCAATCAAACGAGCTGTTGCTGACACCCAGCGCGTGGCGCAAACGGAAGCGACGGTGCTGCTGCTCGGTGAATCGGGTACCGGTAAAGAGCTTTTTGCGCGCGCTGTCCATCATCTCTCGGGCCGGCGCGACAAGCCTTTCGTCGCCATTAATTGCGCTGCGATTCCGGAGACGCTCATTGAGAATGAATTGTTTGGCCACGAACGTGGCGCGTTTACTGGCGCGGGCGATAGACGGCTGGGAAAGTTTGAACTCGCGTCGAGTGGTACTGTCTTTCTCGATGAGATCGGTGAACTGCCGCTGACCGTGCAGGGAAAGTTATTGCGCGTGATCGAGGAAAAGGTAGTAGACCGCATTGGCGGACGCGCGCCCGTACCGGTTGATGTTCGCATCGTGGCCGCAACAAATCGGGACTTAAAAGCAGCAGTAGAACGTGGAGAATTTCGACGCGATCTTTTTTTCCGTCTGGCGGTGTTCCCACTTGAGATTCCACCGTTGCGCGAGCGCGACAGCGATATCGTACTTTTGGCCAAACACTTCGCCGCTGAACTCGGTAAAGAATTACGCGGCCGGGAGGCTATCTTAACTGATGAAGCTTTCGCCGCGTTACGTGCACACAGTTGGCCCGGCAATGTGCGTGAGTTGGAAAATGCGATTGAGCGCGCCTGCATTCTGTCCGACTCGATGATGCTCGAACCAAAAGACCTGGGCTTGGCTACTACTACCGCCGACAATGCTGAGGCGTTGAAGTTGTTTGACCTGACTGGCAGCCTTTCTGAAGCAGCGCAGCGCGCCTTGCGCCTCGTTGAACGTCACAAGATTCTCGAAACTCTCGCGGCAAACGATGGCAATAAGATGCAAACGGCGGAAGATCTGGGCGTCAGTTACAAAACCCTGCTCACGAAAATTAAAGACTACAGTCTCTGA
PROTEIN sequence
Length: 456
MPDILLVEDKDSLRRVLRLTLENAGYTVTEAADGRAALNEVAGGPHKLVLTDLRMPNGSGLDVLRAARAADGNIPVIVMTAFGSIDEAVQAMKDGAHDFLQKPVDSNHLLLIVERALAQERLRTENILLKEEWSRRYGFPRIIGESVAIKRAVADTQRVAQTEATVLLLGESGTGKELFARAVHHLSGRRDKPFVAINCAAIPETLIENELFGHERGAFTGAGDRRLGKFELASSGTVFLDEIGELPLTVQGKLLRVIEEKVVDRIGGRAPVPVDVRIVAATNRDLKAAVERGEFRRDLFFRLAVFPLEIPPLRERDSDIVLLAKHFAAELGKELRGREAILTDEAFAALRAHSWPGNVRELENAIERACILSDSMMLEPKDLGLATTTADNAEALKLFDLTGSLSEAAQRALRLVERHKILETLAANDGNKMQTAEDLGVSYKTLLTKIKDYSL*