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PLM4_65_b1_redo_sep16_scaffold_15925_1

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 1..525

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 173.0
  • Bit_score: 231
  • Evalue 6.30e-58
Transcription-repair-coupling factor Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 174.0
  • Bit_score: 153
  • Evalue 1.60e-34
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 174.0
  • Bit_score: 153
  • Evalue 4.40e-35

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GGCCACATGGATGCGCTGGGATTTGACCTTTACACGCAGATGCTCGAGCGCACCGTTGCGGAGTTGCGTGGCGAAGAAGTGGAAGACGAAACCAGCGTCACGATTAATCTGGGCGTCGACGTGGCCATACCAGATGAATATATTAACGACATGGGCCAGCGACTGCGAACCTACAAGCGTGTTTCCTCGGCCCGCGACGAAGAGACGCTTTCGAATATTCGCAATGAGATCCGCGATCGCTATGGACGGCTGCCCGAGTCGGTTGAGCAACTTTTTGGCTATGCACTACTGCGACGACTGGCAGAAGACCTGAGCGTTCTTTCAATAGATAAGACGACCGACGGTGTTGCGATAAAGTTTAGCGAAAAAGCGCGTATATCCCCGGAGAAGTTAGCGGCATTTATTAACGCTCGGGACGGAGCAGTTTTTAGCCCAACGGGCGTCTTGAAGCTGAATCTAACCGATGATGAACAGGATTATCTGCTGGATACGGTGCGGGGAGTATTGCTGGAAATCAGGGATTAA
PROTEIN sequence
Length: 175
GHMDALGFDLYTQMLERTVAELRGEEVEDETSVTINLGVDVAIPDEYINDMGQRLRTYKRVSSARDEETLSNIRNEIRDRYGRLPESVEQLFGYALLRRLAEDLSVLSIDKTTDGVAIKFSEKARISPEKLAAFINARDGAVFSPTGVLKLNLTDDEQDYLLDTVRGVLLEIRD*