ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_16203_4

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(6605..7594)

Top 3 Functional Annotations

Value Algorithm Source
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 310.0
  • Bit_score: 313
  • Evalue 1.80e-82
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 313.0
  • Bit_score: 170
  • Evalue 1.80e-39
tRNA(Ile)-lysidine synthetase, N-terminal domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 301.0
  • Bit_score: 167
  • Evalue 5.60e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GACTCTACAGCGCTCCTGCTTGGCCTTGATGAATTGATACGAAATGAGAAGCTGCAGCTGAACCTGACGATAGCGCATCTCGATCACGGGCTACGCACCGACAGTTCTAAAGATGCCAGGTGGGTTACCCGGCTTGCGCAGACTCTTGGTTACGACATCATCGTAGGCAAGACTAACCTAAGGATTAAGAAGGCGAGCAAGCCTGAGAATCTCGAGCAGGCAGCCCGCAAGGCACGCTACAAATTTCTACAGAAGACAGCCAACAAGGTGGGTTCGACCTTCGTCTTGACTGCACACACGCTCGACGATCAGGCGGAGACTATTCTGCTGCGCCTTTTGCGTGGCAGCGCCGCCGAAGGGTTGAGCGGCACCCCGCTCGTAAGGGAACTTGCGCCGGGCTCGAAGGTGAAGCTAATTCGCCCTCTCCTGGCATGGGCGCGACGCAGCGATACGGAGGACTATTGTCGGCGCCACCAGGTCGATTTCCGCGTCGATCGGATGAACGACGATGAGGCGTTCTCGCGCGTAAAAGTTCGTAAACAATTATTGCCACTGATGAAATCGTTCAATAGTCGCGTTGTCGAAGCGCTTAGTCGAACCGCCACTTTGCTGAACGAAGATGCGGCTGCGCTTTCAGACGAAGCCCGGCGATTACTCGAATTGGCTTTGCAAAAACCGGCCGGAAATAGTGAAACCAGTTCGCCTTCACTGGACGTAAGGATTCTGCTGCAATCGCCCGCCGCCATACGACGGCGCGCATTGCGAGAGTGGATTCGGCGGTCGCGAGGAGATCTCAGACGCGTTGAAATGGTTCACCTGATTGCCGTGGAAAAGCTGCTTCAGGGCGAGCAAGGGGGACGGGTGGCCGAGTTACCCGGCGGAATGCGGGTCACAAGAAAACAAGGAATGCTGCATTTGTCTCATAAAAAGGGGTTGAAAAAGCCCTTGACGACCTCTAAAATTCGACCCGGTCGACACCGCCGGGCGTAG
PROTEIN sequence
Length: 330
DSTALLLGLDELIRNEKLQLNLTIAHLDHGLRTDSSKDARWVTRLAQTLGYDIIVGKTNLRIKKASKPENLEQAARKARYKFLQKTANKVGSTFVLTAHTLDDQAETILLRLLRGSAAEGLSGTPLVRELAPGSKVKLIRPLLAWARRSDTEDYCRRHQVDFRVDRMNDDEAFSRVKVRKQLLPLMKSFNSRVVEALSRTATLLNEDAAALSDEARRLLELALQKPAGNSETSSPSLDVRILLQSPAAIRRRALREWIRRSRGDLRRVEMVHLIAVEKLLQGEQGGRVAELPGGMRVTRKQGMLHLSHKKGLKKPLTTSKIRPGRHRRA*