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PLM4_65_b1_redo_sep16_scaffold_18334_4

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(4323..7103)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma24 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F524 similarity UNIREF
DB: UNIREF100
  • Identity: 32.6
  • Coverage: 304.0
  • Bit_score: 159
  • Evalue 8.90e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 364.0
  • Bit_score: 153
  • Evalue 1.80e-34
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEU38365.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 364.0
  • Bit_score: 153
  • Evalue 8.90e-34

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Taxonomy

Granulicella mallensis → Granulicella → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2781
TGCGCCTACGCCTCTTCGAGAAAGGAGACCTCGCGTGCTGGCGCCGTCCTCATTCTTCGCTTCTTTCACAACTATTACCCCAGTGAGATTGCCCAGGTTCTCCGTAGCTCAAGGCACTGCGTAGATCAGTGGCAGAGAGTAGCGCGCAGCGAATTGAAGCTCTATATGACTGAGCGAGGCGGGCTCAGGTTAATGAGCACAAAGCTGTCACCGGAACCGCGTCAAACCGCACCTTCCGGCTGGGATGGTGATGTGAGCGGCGAGCTGCGTCAGATGATCTTCAACTCGCGAAAGGGCGAATGTCCACCGCTAGAGCAACTGCAAGAGTTTTACCAATCGAGCAATACAGAAACGCTTACAACCACGAAGCTCGGGCATATTGTTAGTTGCCGCTTGTGTCTTGATGCGGTTAATCGGTTACTCGGGCTGCCGCTGCTGGCCGAGCGGTATCAAAACGAGCAGGGTCCGCCTGGAACACCGCCGCAAGACAAGAATGGTGGGGGTCCATCCGGGGGAGGCACGATTGATCTAAGAAGCAGATACCAGCAGCGCCTGCGCGAGGTCTCAGAGCACAAGCCCAAGGAATTGCGCATCGCGGTAAACGGTTCCCTGGTTAGCTCGCTAAAGGTCAGCTCAGAGGAGTGCGAATTCGATCTTAACTTGCCACAGCAGGAAAGCGTCGAGTTCATCGAAGTCTTTAGTGAGCAGGGCGTTCGGTTATTGTTCTTTAGCGTTGGGGAAACTGACTCCCGAAATACCCAGCGAAATACTCAGGAATGGGCCGCCATTGAGTTGAGCGAAGGGCGTACGCTCGAGGCATGTTTGCGCGTCGAGAATGGACCCGCTCTACAAGTTAAATATAACGAACCGCTGCTTGCGGATGCGGTAGCTCAAACGCCTCTAAAGTTAATCAAGGACGCAGTATCGGTAGCTCCAGCCGTAGCGAGAAGCGGCGACTCTGATAATGGATACTCTTCTTCATGGCTTAGTTCGTTGTTCCGCCTCGTGCGGTGGCCGAAGCGAGCGTTTCCGAATGCGGTCAAGCCTGGAGAAACAGTTGCGACAAGCCCGTCATCGATTCCAGATACCCGAGCGAATCATTTCGCCTCAAGTCAAGGAAGTCTGCTGGGCCTTGCGTTACCGGCGATTCGAAAGCCGCTGTGGGCACGTCCGGAATGGGTGGCAGCGCTCGTTTCGACGGTCGTCGTAGTCGGCGGCTTCCTATTCTTCAGGACGAATACCACGCCAACTCTCACTGCCACGAATCTCCTCGAGCGAGCGAGTGTAGGTGAGAAGATGGTCTGGAACAGTCCCGATCAAGTCACTCATCGGATAGTCGATCTGGAGGAGCGCAGGTCGGCGGGCGGAGCAGTGGTTTCGCGGCGCCGGATCGAGAGCTGGCAAAACTCCGCGCAAGGTGATCGGGCCGAGCGGGTCTACGACGAGAGCAATAGAATGATCGCCGGAGCGTGGCAGAAGGCCGATGGTTCACGCACCATTTACCATCACGGCGGCAGGCCGCGTCCGGAAACGGCGCCAGCCAGAACCGATAGCCTGCTACTCAACCTGGATGAGATATGGCAACTAGAACTATCGGCGAAGGAGTTCAGCCGGCTCACCGCCGGTGAGGTTAATGCGCAGGTGGAAGAGAGCGCAGACAGTTACCTTATTACTTATGGTACCGCGCGGACGATTGGCGCGAGCCGTTTAATGAAGGCCACGATGAAGTTGAGCCATGCCGACCTGCATCCGATTGAGCAGGCTCTGCTGATCGAACGTGGTGGAGAAGTACGCGAGTACCGGTTCGTCGAAACCGGCTTTGAGCGACTGCCGCAGAAGGATGTGGCGCCGACCGTCTTTCAGGTTGAACCAGAGTTGCTTTCCGAAAATCGGAAGAATGAAGGCGCAAGGGTGAAACAACCAGTTGATTTCATTCACCCTTCATCTTTCATCCCTCATCCTGCTGCAGTGGCATCAGCCGAACTAGAGGTCGACGTTGCTTACCTCCTTAATCAGGCAAAGGGCGACCGTAGTGAACAAGTAAGTCTGTCGCGCACGCCTACGGGCCTGTTGCGTGTTGAAGGAGTTGTTGACACTGAGCAACGCAAAGACGCGTTGGTTCGCGCGCTGGCTCCAGTCAGTAACAACCCGGCAGTGAAAATCGAAATTAGTACAATCGGTGAACCGATGCCGCGCCAGCCGCGCACTTCATCAGGCGCCGTCACTCTTAGAGAGGCGGAAGAGACCGCCAGCACAGTGGCTGTAGATAACGAGCTGCGCGATTACCTCTCGCGAAAAGATGCGACCCTGAAAACGGGTAACGACCTCGATGAAGCCGTACGGTCTTTCTCTTCAAGAATGGTGAATCGCGGATACCGGGCCTTGTTTCGTGCCATCGAACTCAAACGGCTGATTAATCGGTTCGCGAATGTCGACATGCGCACGGTTACTCCCGACGCGCGCGCCAAGTGGCTGCAGATGGTGCGTGAGCACGCCGCGGCTTTTGAGCGCGAGACTGCAGCTCTGCGCCAGGACATTGAACCAGTTTTCTTTTCGAGCTCCCCTTCAGTGGCGGCTGAAGAGATTGAGATTGCCGGCGATGTGGACCTGGCACGCGCGGTCGAGAGGCTGCACAAGGTAGCGCTGGCCAACAATGACGCGCTTCGCGCGGCGTTCACAATCTCTGCGCAAAGTTCGAGGGCGGTAAAGTCATTGCAATTCTGGCGCTCGCTCTGCAGCGCGGAGAATCTGGCTGCCCGCATCAGGAAGTACCCGGGATGA
PROTEIN sequence
Length: 927
CAYASSRKETSRAGAVLILRFFHNYYPSEIAQVLRSSRHCVDQWQRVARSELKLYMTERGGLRLMSTKLSPEPRQTAPSGWDGDVSGELRQMIFNSRKGECPPLEQLQEFYQSSNTETLTTTKLGHIVSCRLCLDAVNRLLGLPLLAERYQNEQGPPGTPPQDKNGGGPSGGGTIDLRSRYQQRLREVSEHKPKELRIAVNGSLVSSLKVSSEECEFDLNLPQQESVEFIEVFSEQGVRLLFFSVGETDSRNTQRNTQEWAAIELSEGRTLEACLRVENGPALQVKYNEPLLADAVAQTPLKLIKDAVSVAPAVARSGDSDNGYSSSWLSSLFRLVRWPKRAFPNAVKPGETVATSPSSIPDTRANHFASSQGSLLGLALPAIRKPLWARPEWVAALVSTVVVVGGFLFFRTNTTPTLTATNLLERASVGEKMVWNSPDQVTHRIVDLEERRSAGGAVVSRRRIESWQNSAQGDRAERVYDESNRMIAGAWQKADGSRTIYHHGGRPRPETAPARTDSLLLNLDEIWQLELSAKEFSRLTAGEVNAQVEESADSYLITYGTARTIGASRLMKATMKLSHADLHPIEQALLIERGGEVREYRFVETGFERLPQKDVAPTVFQVEPELLSENRKNEGARVKQPVDFIHPSSFIPHPAAVASAELEVDVAYLLNQAKGDRSEQVSLSRTPTGLLRVEGVVDTEQRKDALVRALAPVSNNPAVKIEISTIGEPMPRQPRTSSGAVTLREAEETASTVAVDNELRDYLSRKDATLKTGNDLDEAVRSFSSRMVNRGYRALFRAIELKRLINRFANVDMRTVTPDARAKWLQMVREHAAAFERETAALRQDIEPVFFSSSPSVAAEEIEIAGDVDLARAVERLHKVALANNDALRAAFTISAQSSRAVKSLQFWRSLCSAENLAARIRKYPG*