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PLM4_65_b1_redo_sep16_scaffold_18483_5

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 3945..7070

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 1047.0
  • Bit_score: 1363
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 1047.0
  • Bit_score: 1035
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS6_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 1047.0
  • Bit_score: 1035
  • Evalue 0.0

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3126
ATGACGACGACGGCAACAAAAACTTCAGCGCTCCAGAGTGTCTTACGCCGCATCACTGAAACTCCGGAGTTCAGAGGCGCAGTCACGGAAATCAATCGTGGCGCCCGGGTAGTTTCAATAAGTGGGCTCGTAGCCGGCTCCGCCCGCGCATTGGCCCTGGCTGCATTGCAGCGGGAAACCGGAAAACGTTTTGCGGTCGTCACGCAATCAAATCGTGACCTTGAACCGTGGGAAAGCGATTTGCGATTCTGGTATTGCGCTCTCTCAGGTAAAAGCAATTGCGAAGACGAAGTGCTCATCCTGCCGTCGTCAGAGAGCGATCCTTATGCCGGTTCCTCGCCACACCCCGACACGCTCGAGCGGCGCGCATTAACGCTCTGGCGCCTGGCTAATCACAACCAGGATTTCGTTCTGCTCACCACACGCGCTTTGGCCCGACGAACAGTGGCGCCAGATGAGATCACCCTAGCAGGAGCTTTCCTCGCCAGGAATGATACTCAGTCGCCCGAAGAGCTCGTGGACCGGCTCGTATCGGTTGGATACGTGCGCGAGGATCCGGTGGGAGCCGTGGGCGAGTTCTCGATGCGCGGCGGCATTCTTGACGTTTGGTCACCCGGACAGGAAAGACCGGTGCGCATCGAATTCTTCGGAGACGAGATTGATTCAATCCGAGATTTTGATCCTGAGACACAACTCTCTACCAGTCAGTTGAGCTCAATAGAGATCGTTCCAATGCGCGAAATCGTGGTTCGCAGCCAGGATTTTAGCCAATGGGCCAGCGCGGCTCGCCGGCGCTGGAGCGACGAACGTTATGCGCGAGCGTTGCGCGATCGCACCATGCTTGCGGATGAAGGAGAAAGCTTCGCAGGCTGGGAATGGCTGATGCCCATTACCCGCGAGCGAAGCGCGAGCGTGTTTGATTATCTGCAGGACGCGGTGCTGATTGTTGACGAACCATCCTCGGTGGAAACATTTCTTGGCGAAGTTTACCAGACGCTCGCCGATCGTTATGCCGAAACCGACGCGGTTGACGACATCGCGGTAACACCCGAAGAGCTTTACCTGTCGCCGGAAGAACTACTAGCAAAGCTGGATCAAAAACAACGGGTCGAACTGCGTGTACTTGGACGCGCCGCGGCTGAGCTCGATCAAGCGGTTGCTTTGGATGCCGACGGGCCAAAGCTTCAATTGGGGCGCAAGCGCACTACACGCGCCCCACTCTTCCTTTTCCCGGTTGTCGGACAAGTGCCAGAAATCGAATGGCAAAGTCAATCAACGCGGAAGTATCACGGCCGGCTTGCAAGTCTCGCCGCGGATTTGATTAGCGCGCGCGAGAACGGCACAACAACACTTTTTGTAATGCCGAGTTTGGGCGTTGCCGAACGTGTGGCGGAGATTCTCGCTGAGTATGAGATCGACGCGCAGCTTTCGTTTGCGTGCGAAACCTCCGCCGCCGCTGACTCGCCTGCGGGGCAGACAATTGTGACCGTCGGCCGGCTGAGTGGTGGTTTTGAAATGGTTGGTGCGCGCCTCTTAACACATATTGAGGCTGACCTGTTTGACGAAGCCGGCGCGCAAGCGCTTGAGCGACGCGCCCCTGGGGCAGAAGGCAGTAGGCAGAAGGCAGACGGTAGACAGAAAAAATCGAAGACTGCGGCTTTTCTTTCCGACTTTCGCGATCTCAAGCCAGGCGACTACGTGGTGCACATCGATCACGGAATAGCGCGTTTCGGCGGCTTGCAAACGCTTGATCTGGGAACGCGCAGCAGCGAGTTTATGCTGCTCTTTTACGCCGAGGACGCAAAGCTTTACGTGCCAGTTGAGCGGCTTGATCTCGTGCAGCGCTATTCGAGCGCGGAAGGACATCAGCCCACCCTCGATCGTCTTGGCGGGCTGGGCTGGCAGAAGACGAAGGCTAAGGCGAAGCGCGCAATGCGCGACATGGCCGACGAGCTTTTGCGTTTGTATGCCGAACGTAAGCTCGTTGGTGGTTTTGCGTTTGCCGGCGACACGCCCTGGCAGCGCGAGTTTGAAGATGGTTTTGAATACGTCTTAACACCCGATCAGGAAACAGCTATCGAAGACGTCAAGCACGACATGCAAGAGCCGACACCGATGGACCGTCTGCTTTGCGGCGATGTTGGTTACGGAAAGACTGAAGTGGCTATGCGCGCTGCTTTCAAAGCCGTGATGGAGGGGAAGCAGGCGGCAGTGTTGACGCCAACAACTGTGCTTGCCTACCAGCACTACGACACCTTCCGTAGTCGCTTCGCGCCTTTCCCGGTAAAGGTTGAATTGCTCTCGCGCTTTCGTTCCGCGAAGGAACAGAAGGACGTGGCAAAACGCGTCGAGTCAGGTGAAGTAGACGTAGTAATTGGCACACACCGGTTGCTGTCGAAAGATGTTCGGTTCAAAGAACTGGGTCTGGTTGTGGTTGACGAGGAACAGCGTTTTGGAGTTGCCCACAAAGAGAGATTGAAGCATTTGAAGAAGCGCGTCGATGTATTGACGCTTTCCGCCACACCAATTCCGCGCACCCTCAACATGTCGCTGAGTGGATTGCGCGACATGTCTTTGATCGAAACGCCTCCGCGTGATCGACTCGCAATTCAGACACAGGTGGTTCAGTTTTCTGAGAACGTAATAAAGTCGGCGATTGAACTCGAGCTCGGTCGCGGCGGCCAGGTGTTCTTCATACACAATCGTGTGGAAACCATCGATACTGTAGCGGCCCTCGTTCAGCGCCTGGTACCGCAGGCGCGTTTGGTGGTTGGCCACGGGCAGATGAACGAAAAAGAGATGGAGCGCGTGATGCTGGATTTTATTGAGTTTAAGTATGACGTGCTGGTTGCCACTACCATCATTGAGAACGGGATAGACATCCCCCGCGCCAACACAATCATCATAAACCGCGCCGATCAATATGGTCTTTCTCAGCTTTATCAACTGCGGGGGCGTGTGGGCCGTTCAAATCGCCGCGCTTATGCCTATCTTTTGATTCCGGGTGAGCAGGAACTCTCACCTATAGCCAGGCGCCGTTTGGCGGCAATTCGGGAGTTTTCAGACCTGGGTGCAGGCTTTCGCATCGCCGCCCTCGACCTCGAACTGCGAGGTGCCGGCAATCTC
PROTEIN sequence
Length: 1042
MTTTATKTSALQSVLRRITETPEFRGAVTEINRGARVVSISGLVAGSARALALAALQRETGKRFAVVTQSNRDLEPWESDLRFWYCALSGKSNCEDEVLILPSSESDPYAGSSPHPDTLERRALTLWRLANHNQDFVLLTTRALARRTVAPDEITLAGAFLARNDTQSPEELVDRLVSVGYVREDPVGAVGEFSMRGGILDVWSPGQERPVRIEFFGDEIDSIRDFDPETQLSTSQLSSIEIVPMREIVVRSQDFSQWASAARRRWSDERYARALRDRTMLADEGESFAGWEWLMPITRERSASVFDYLQDAVLIVDEPSSVETFLGEVYQTLADRYAETDAVDDIAVTPEELYLSPEELLAKLDQKQRVELRVLGRAAAELDQAVALDADGPKLQLGRKRTTRAPLFLFPVVGQVPEIEWQSQSTRKYHGRLASLAADLISARENGTTTLFVMPSLGVAERVAEILAEYEIDAQLSFACETSAAADSPAGQTIVTVGRLSGGFEMVGARLLTHIEADLFDEAGAQALERRAPGAEGSRQKADGRQKKSKTAAFLSDFRDLKPGDYVVHIDHGIARFGGLQTLDLGTRSSEFMLLFYAEDAKLYVPVERLDLVQRYSSAEGHQPTLDRLGGLGWQKTKAKAKRAMRDMADELLRLYAERKLVGGFAFAGDTPWQREFEDGFEYVLTPDQETAIEDVKHDMQEPTPMDRLLCGDVGYGKTEVAMRAAFKAVMEGKQAAVLTPTTVLAYQHYDTFRSRFAPFPVKVELLSRFRSAKEQKDVAKRVESGEVDVVIGTHRLLSKDVRFKELGLVVVDEEQRFGVAHKERLKHLKKRVDVLTLSATPIPRTLNMSLSGLRDMSLIETPPRDRLAIQTQVVQFSENVIKSAIELELGRGGQVFFIHNRVETIDTVAALVQRLVPQARLVVGHGQMNEKEMERVMLDFIEFKYDVLVATTIIENGIDIPRANTIIINRADQYGLSQLYQLRGRVGRSNRRAYAYLLIPGEQELSPIARRRLAAIREFSDLGAGFRIAALDLELRGAGNL