ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_33202_5

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 4226..5029

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 265.0
  • Bit_score: 320
  • Evalue 1.20e-84
Tryptophan synthase alpha chain bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 262.0
  • Bit_score: 263
  • Evalue 2.10e-67
tryptophan synthase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 259.0
  • Bit_score: 249
  • Evalue 6.90e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 804
TTGGGACGAATCGAGGATGCGTTTAGCCGGCTAAGACGAGAAGGCAATAAAGGCTTCATTCCTTTCATTACTGCCGGCGACCCCGATCTCGAAACAACTGCCGAGCTGCTGATTAAACTGGCAGACTGCGGCGCTACTGTCATCGAGCTCGGCGTTCCATTCAGCGACCCGATGGCAGATGGTCCGGTGATCCAACGAGCATCCGAACGCGCCCTCAAACACGGTTTTGGTTTGAAAGAAATCTTCGAGACCACCGCAATAGCCCGTAGCAGAATCGACACTCCGATAGTCCTGTTCAGCTACTTCAATCCTCTATTGCAATACGGCATCAATAATCTGGCGCGCGACGCCGCGCGGTCGGGTGTCGATGGAATTCTTGTAACTGACCTGACGCCGGAGGAATCCGAAGAGTTTGCAGCGACCCTCAAGTCAAGTGGTATCGACTTGATCTTCCTGGTTGCGCCGACATCTACCGACGCGCGTCTGCGAATGATTGCCGCGCATGCAAGTGGTTTTGTATATGTCGTCTCGCGTGCTGGTGTGACCGGGGCTCGCGATAAAGTGAGCCGCGAGGCAGAATTGCTGGTCACGCGCGTCCGCAAAGTTTCCAGTTTGCCTGTGGCAGTCGGGTTTGGTATCTCCAGCGCTGACCAGGTACAGCAAACTCTTGGCTACGCGGATGCCGCGGTAGTGGGCTCAGCCATTGTCGACCAAATTGAAAAGCTCTCGGCAGCACCGAATCTCGTAAACGAAATAGGCCGGTTCGTGCGCAGTCTGATCCCTGCGGGAGCGAAAACAAGATGA
PROTEIN sequence
Length: 268
LGRIEDAFSRLRREGNKGFIPFITAGDPDLETTAELLIKLADCGATVIELGVPFSDPMADGPVIQRASERALKHGFGLKEIFETTAIARSRIDTPIVLFSYFNPLLQYGINNLARDAARSGVDGILVTDLTPEESEEFAATLKSSGIDLIFLVAPTSTDARLRMIAAHASGFVYVVSRAGVTGARDKVSREAELLVTRVRKVSSLPVAVGFGISSADQVQQTLGYADAAVVGSAIVDQIEKLSAAPNLVNEIGRFVRSLIPAGAKTR*