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PLM4_65_b1_redo_sep16_scaffold_48622_2

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(1408..2511)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 361.0
  • Bit_score: 594
  • Evalue 7.80e-167
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase bin=GWC2_Deltaproteobacteria_56_8 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 357.0
  • Bit_score: 435
  • Evalue 3.30e-119
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 351.0
  • Bit_score: 428
  • Evalue 1.10e-117

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGCGACAGTCGAAGGCAGTTAAAATTAAGCATGTTCAGATTGGCGGTGGTGCGCCGGTCGTCGTGCAGTCTATGACGAAAACGGACACTGCCGATGTCGGCGCAACCGTGGCTCAGATTGAAGAGATGGTGCGCGCGGGCTGCGAGATCGTGCGGCTGGCCGTGCCGGATAACGATGCGGCGATCGCCCTGAAAGAGATTCGCAAGCGAGTGCCGGATGTGCCTCTGGTGGCAGACATTCACTTTCACTACAAACTCGCCCTACTGGCCCTGGAAGCCGGCATCGACAAGTTGCGGCTCAATCCCGGCAACATTGGCAAGCATGAGCGCATTGTCGAAGTAGTGCGGGCAGCCCAGGCGCAGCAGGTACCGATTCGCATTGGCGTCAACGGTGGCTCACTGGAAAAAGACCTGTTGAAGAAATATGGCACGGCGACGCCCGAGGCGATGGTCGAGTCTGCCATGCGTCACATTCAGATTCTTGAAGACCTGGGCTTTACCGACACGATCATTTCGCTGAAAGCGTCCGACGTCCATCGCACAGTCGCCGCTTATCGTCTGCTGGCGGAGAAAGTCGACTATCCGTTTCATCTTGGCGTCACCGAAGCGGGCACAGCTTTTGGCGGCACGATCAAATCCTCGATCGGACTCGGCATTCTTCTGCATGAAGGCATCGGCGATACGATTCGCGTTTCACTTGCCGCTGAGCCGCAGGAAGAAGTACGTGTAGCCTGGGAGATTGTTAAGTCACTCGGGTTGCGCACCCGTGGAGTGACCGTGGTTGCGTGTCCAACCTGCGGCCGGCTCGATATCGACAACTTCGTCGAGATTGTGACCGAGATTGAGCGCCGGCTGGCCCACGTCGAAGAGCCCTTGCATCTTTCGATTATGGGTTGCGCTGTTAACGGACCGGGCGAAGCACATGATTCGCAACTCGGAGTTACCTTCGGTCGCGGCGTGGGGATGATTTTTAAGGACGGCGTGCCAATGCGCAAAGTTTCCGGCGAAGATATCGTCGAAGCCTTTGTGATGGAAACTGAAAAACTCCTCGCTGAAATCGCGACTAAAAAGGGAACTGAACCTGAACTGGTGAGCATCACTTAA
PROTEIN sequence
Length: 368
MRQSKAVKIKHVQIGGGAPVVVQSMTKTDTADVGATVAQIEEMVRAGCEIVRLAVPDNDAAIALKEIRKRVPDVPLVADIHFHYKLALLALEAGIDKLRLNPGNIGKHERIVEVVRAAQAQQVPIRIGVNGGSLEKDLLKKYGTATPEAMVESAMRHIQILEDLGFTDTIISLKASDVHRTVAAYRLLAEKVDYPFHLGVTEAGTAFGGTIKSSIGLGILLHEGIGDTIRVSLAAEPQEEVRVAWEIVKSLGLRTRGVTVVACPTCGRLDIDNFVEIVTEIERRLAHVEEPLHLSIMGCAVNGPGEAHDSQLGVTFGRGVGMIFKDGVPMRKVSGEDIVEAFVMETEKLLAEIATKKGTEPELVSIT*