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PLM4_65_b1_redo_sep16_scaffold_84160_3

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(1122..1700)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 179
  • Evalue 2.90e-42
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 167.0
  • Bit_score: 165
  • Evalue 9.50e-39
Tax=GWF2_Lentisphaerae_50_93_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 179
  • Evalue 4.10e-42

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Taxonomy

GWF2_Lentisphaerae_50_93_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 579
GTGAAACACGAACAGATGGACATCTCGGAGCTGCAAGCTGAGCTCGAAAAACTTCATGGAGCCAGTTTTGGTTGGGCCCTCAACTGTTGCCGGCGCGACCGGGCAGAAGCAGAAGAAGTCTTGCAAACGGTCTATTTAAAGATCCTTGAAGGCAAAGCGCGTTATCGGGGTGAATCAAACCTTAAGACATGGCTGTTCGCGGTCATACGCAAGACAGCGATAACCGCGCAGCGCAAGAGGTTGCTGCGCACACTGAAATTAATAGCTGCCTCGAACCCCAGACCTGAGCGAAACTCTTTCGCGGTAGAACCCGCGGCAGCGTTCGAAAGATCGGAAGCGCAGAAGCAGTTTCAAAAGGCTCTCGGAAGTTTGCCTGCGCGCCAAAGAGAAGTGTTGCACCTGGTGTTTTACGAAGATTTGAGTTTGCGCGAAGCCGCGGATGCAATGGGCGTCTCGATAGGCAGTGCTCGTCAGCACTACGAACGGGGCAAAAAGCGTCTGCGCGAGTCTTTGAATCGAGAGGAACTTGACTATGGAATTAGTTGGAAACGAAAAGAAAATCCGGGCGCTGTTTCGTGA
PROTEIN sequence
Length: 193
VKHEQMDISELQAELEKLHGASFGWALNCCRRDRAEAEEVLQTVYLKILEGKARYRGESNLKTWLFAVIRKTAITAQRKRLLRTLKLIAASNPRPERNSFAVEPAAAFERSEAQKQFQKALGSLPARQREVLHLVFYEDLSLREAADAMGVSIGSARQHYERGKKRLRESLNREELDYGISWKRKENPGAVS*