ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_453_29

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 32610..35759

Top 3 Functional Annotations

Value Algorithm Source
hydrophobe/amphiphile efflux-1 HAE1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 1039.0
  • Bit_score: 1456
  • Evalue 0.0
hydrophobe/amphiphile efflux protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 1045.0
  • Bit_score: 1251
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 1044.0
  • Bit_score: 1538
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3150
GTGGTTTCCGACGTCTTCATCCGGCGCCCGATCTTCGCCACCGTCTGCTCGCTGCTGGTGATCCTGGCGGGAGCGATCTGCATCCCGCTGCTCCCGATCGCCCGCTATCCGGATCTCGCGCCGCCGTCCGTCACGATCACGGCGTTCTACACGGGCGCCAACGCGCAGGCGGTCGAGAGCGCCGTCACCACGCCGATCGAGCAGGTGGTGAACGGCGTCGAGGGGATGACCTACATCCAATCCTCGAGCACCAACAGCGGCGTCAGCACGATCAACGTGTACTTCGAGATTGGGCGCAACCCCGACCTCGCCGCCGTCGACGTGCAGAACCGGGTCAACCAGGTGCTGGGCAGGCTGCCTGCGGACGTGCGCACCACCGGCGTCACGGTCACCAAGAACACCGCCGGGTTCATGGGCGGCCTCGGCTTCTTCTCGCAGGACAACCGCTACAGCGCGCAGTTCATCAGCAACTACCTGGACGTCTACGTGCGCGACGCGCTCAAGCGCGTGCCCGGCGTCGGCAACGTGCTCATCTTCGGCGAGCGCAAGTACGCGATGCGGCTCTGGCTCGACCCCGCGCGGCTCGCCGCCCGCGGCATCACCGCCGGCGACGTGGTGCGGGCGCTGCGCGAGCAGAACCTCCAGGTGGCCGCCGGTGCCCTCGGCGACGCCCCGGCGGACGCTGGCCAGATGTACAACCTGAGCGTCCGCGCCCTCGGCCGCCTGACGGAGGTGGCCCAGTTCGAGAACGTGGTGGTGAAGGCGGGCGCAGACGCCGCGCTCGTCCGCGTGCGCGACGTCGGCCGCGCCGAGCTCGGGGCCGAGACCTACTCCGCCAACCTCCGCTTCATGGGTCTCGAGGCCTCCGGCATGGGCATCCAGCTGCTGCCCTCGGCCAACGCGCTCGCCGTCTACCAGGGCGTGATGAAGGAGATGACCCGGCTCGAGCGGGCCTTCCCGCCCGGCCTCGAATGGCGGCTCGCCTTCGACAACGTGGGCGTCGTGCGCGAGTCGATCCAGGAGGTGCTGTTTACGCTCGTCGAGGCGATCCTGCTCGTGATCCTGGTGATGTTCCTGTTCCTCCAGAACTGGCGCAGCACTCTCATCCCGGCGATCACGATCCCGGTGTCGCTCGTCGGCACCTTCGCCTTCGTCAAGCTGTTCGGCTTCTCGATCAACACGCTCACGCTGTTCGGGATCGTGCTCGCGACCGGGATCGTGGTGGACGACGCGATCGTGGTGATCGAGAACATCGAGCGCCACATGGCCGAGCACAAGGTGCGCGCGTACCGCGCGGCGCTCGACGCCATGCGCGAGGTGTTCGGGGCAGTCGTGGTGATCGGCATCGTGCTCGTGGCCGTGTTCGTTCCGGTCGCCTTCTTCCCCGGCACCGTCGGCCGGCTCTACCAGCAGTTCTCGCTCACGATCGCCTTCGCCGTGATCCTCTCCGTCTTCAACGCGGTCACCTTCACCCCCGCGCTCTCGGCGCTGCTGCTCGACCGGGAGAGCCACACGCACGGCCGCTTCTTCACGGCCGTAAACCGCGTGATCGACGGCGGTACGCGGGGCTACGTGCGGCTGCTCACGCGCGCGCTCGACCGGCGGCCGCTGATGCTCGCGCTCTTCGGTGTCGGCTTGCTAGCGACTGTGTGGCTGTTCAGGAACGTGCCGTCGGCGTTCGTTCCCGAGGAGGACGAGGGCTACTTCATCAGCGTGTTGCAGGCACCCGCCGGGGCGTCGCTCGAGTACACCACGGGCATCGCCCGCCAGGCCGAGGAGATCCTGTTCAAGGACCCCGACATCCGCGCGGCCTTCTCGGTGGTCGGCTTCAGCTTCAGCGGCGCCGCACCGAACAGCGGCCTGATCTTCACCCGGCTCAAGGACTACGACGAGCGGCGCGGGAAGAGCCACTCGCTCGCGGCCGTGCTCAACCGGGTGCGCGGGCCGATGATGTCGATCCCCGGGGCGCTCGTGATCCCGTTCGCACCCCCGGGCATCCAGGGCCTGTCCGTCTTCGGCGGCTTCCAGTACGAGCTGCTCGACCAGACGGGCGGCGACATCTCGCGGCTGTCGGACACGCTCCGCTCGTTCATCGCCAGCGCCAACCAGAGCGGCCGCGTGGTGGGCCTGTTCTCGAGCTTCCGCACCAACGACCCCCAGCTCGTGGTGGAGATCGACCGCGACAAGGCCCGCAGCCTGAACCTGCCGCTGCAGGAGGTGACCGACGCGCTCCAGGTGTTCCTCGGCTCGACGTACGTGAACGACTTCGACTTCAACAACCGGGCGTACCGCGTGTACGTGCAGGCCGACCAGCAGTACCGCTCCGACCCGAAGGACCTGCGCCAGTTCTACGCGCGGGCCGCGAGCGGCGCGATGGTGCCGCTCGACAACGTAGTGCGCACGCGCGAGACCACGGCGCCCCAGGTGATCAGCCACTTCAACCTGTTCCGCTCGGCCGAGATCAACGGCGTGCCCGCGCCCGGCTCGAGCTCGGGCCAGGCGCTGCGGGCGATGGAGCAGCTCTCGCGCGAGGTGCTGCCTTCCGGCTTCGACTTCGCTTGGGCGGGCCAGTCGCTCGAGGAGGTGAAGGCCGGCACGCAGGTGGTCTTCATCTTCGGGCTGAGCCTCGTGATCGTGTATCTGGTACTCGCCGCGCAGTACGAGAGCTGGGTGCTTCCGTTCATCATCCTGCTGGGCGTGCCACTCGCCGTCGTGGGTGGGCTCGGCGCGCAGTGGCTGCGCGGCCTCGCCAACGACGTGTTCTGCCAGGTGGGGCTCGTGATGCTGATCGGGCTCGCGGCCAAGAACTCGATCCTGATCGTGGAGTTCGCCGAGCAGCTGCGCGAGCGCGGCCTCGGCATCCGGGAGGCGGCGCTCGAGTCGGCCCGCATCCGGCTGCGGCCGATCCTGATGACCTCGTTCGCCTTCATCCTGGGCGTGATGCCGCTCGCCGTGGCCACCGGCGCAGGCGCGGGCGCCCGCAACTCCGTGGGCACGTCCGTGGCCGGCGGCATGCTCGCCTCGACGCTGCTCTCGATCTTCTTCATTCCCGTGCTGTACGTGGTGATCCGCTCGCTCGCGCCCGGGACGCTGCGGCGGAGAGCCGAAGACGACGCGCCGGTCGGCGAGAAGGGAGAAGCCCATGCGTGA
PROTEIN sequence
Length: 1050
VVSDVFIRRPIFATVCSLLVILAGAICIPLLPIARYPDLAPPSVTITAFYTGANAQAVESAVTTPIEQVVNGVEGMTYIQSSSTNSGVSTINVYFEIGRNPDLAAVDVQNRVNQVLGRLPADVRTTGVTVTKNTAGFMGGLGFFSQDNRYSAQFISNYLDVYVRDALKRVPGVGNVLIFGERKYAMRLWLDPARLAARGITAGDVVRALREQNLQVAAGALGDAPADAGQMYNLSVRALGRLTEVAQFENVVVKAGADAALVRVRDVGRAELGAETYSANLRFMGLEASGMGIQLLPSANALAVYQGVMKEMTRLERAFPPGLEWRLAFDNVGVVRESIQEVLFTLVEAILLVILVMFLFLQNWRSTLIPAITIPVSLVGTFAFVKLFGFSINTLTLFGIVLATGIVVDDAIVVIENIERHMAEHKVRAYRAALDAMREVFGAVVVIGIVLVAVFVPVAFFPGTVGRLYQQFSLTIAFAVILSVFNAVTFTPALSALLLDRESHTHGRFFTAVNRVIDGGTRGYVRLLTRALDRRPLMLALFGVGLLATVWLFRNVPSAFVPEEDEGYFISVLQAPAGASLEYTTGIARQAEEILFKDPDIRAAFSVVGFSFSGAAPNSGLIFTRLKDYDERRGKSHSLAAVLNRVRGPMMSIPGALVIPFAPPGIQGLSVFGGFQYELLDQTGGDISRLSDTLRSFIASANQSGRVVGLFSSFRTNDPQLVVEIDRDKARSLNLPLQEVTDALQVFLGSTYVNDFDFNNRAYRVYVQADQQYRSDPKDLRQFYARAASGAMVPLDNVVRTRETTAPQVISHFNLFRSAEINGVPAPGSSSGQALRAMEQLSREVLPSGFDFAWAGQSLEEVKAGTQVVFIFGLSLVIVYLVLAAQYESWVLPFIILLGVPLAVVGGLGAQWLRGLANDVFCQVGLVMLIGLAAKNSILIVEFAEQLRERGLGIREAALESARIRLRPILMTSFAFILGVMPLAVATGAGAGARNSVGTSVAGGMLASTLLSIFFIPVLYVVIRSLAPGTLRRRAEDDAPVGEKGEAHA*