ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_673_18

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 20382..21419

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator Tax=Pedosphaera parvula Ellin514 RepID=B9XK02_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 308.0
  • Bit_score: 348
  • Evalue 6.60e-93
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:CDM65037.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 344.0
  • Bit_score: 415
  • Evalue 4.70e-113
Periplasmic binding protein domain protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 335.0
  • Bit_score: 404
  • Evalue 1.70e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCAGATGCACAGCACCTCATCCCGCTCCCGCGGCTTCCTGCTCGCGCTCGCGATCCTGGTCCTGGCGCTCCCGGCTTGTGGCAAGAGCCAGGGTCCCCGCGGCAGCCAGGAGCATCCCTACCGGATCGCGGTGATCCCGAAAGGCATGACCCACGAGTTCTGGCGCACGATCCACGCCGGTGCGATCCGGGCCCAGCGAGACCTCGCCGCCAAAGGCGTCCACGTGGAGCTCGTCTGGAAGGGACCGCTCCGCGAGGACGATCGCGAGCAGCAGGTCCAGGTGGTCGAGTCCTTCGCGAGCCAGGGCATCGACGGAATCGTGCTCGCGCCGCTCGACGAGAAGGCGCTCGTGCGTCCAGTCGAGGAAGCGGCCCGCCTCAACGTCCCCACGGTGATCATGGACTCGGCGCTCGCGTCGGACCAGATCGTGAGCTTCGTCGCCACCGACAACTACAAGGGCGGCGAGCTGGGAGCCGACGCGCTCGGCCAGGCGATGAACGGCAAGGGCAAGATCCTGCTGCTGCGCTACGCGGAGGGCTCGGCGAGCACCACGGCCCGCGAGGCGGGCTTCCTGGCGCGGCGCGAGGCCGCCTGGCCCGGGCTCGAGCTCGTGTCTTCCGACCAGTATGCGGGCGCCACGCGCGACACCGCCAAGCGCGCCGCCGAGAACCTGCTGAACCGCTACGGCCGGGATCTCGACGGCATGTTCGTGGTCAACGAGTCGTCCACCTCCGGAATGCTGCTCGCGCTGCAGGACGCGGGGCTCGCCGGCAAGGTCAAGTTCATAGGCTTCGACTCGAACCAGGCCTTCGTCGACGCGATGCGCAAGGGAGAGCTCCACGGCTTCGTGCTCCAGAACCCGTTCCGCATGTGCGGGCTCGCCGTCGAGGCGCTCGTCGATCACCTGCAGGGCCGGCCCGTCGCCAAGCTGGTCGACACCGGGGTCTCGGTCGTCACCCCCGCGAACCTCGACGCCCCCGAGATGCAGGCCCTGATCAAGCCTCCCCTCGACCAGTACCTCAAGCCCGGCGAATGA
PROTEIN sequence
Length: 346
MQMHSTSSRSRGFLLALAILVLALPACGKSQGPRGSQEHPYRIAVIPKGMTHEFWRTIHAGAIRAQRDLAAKGVHVELVWKGPLREDDREQQVQVVESFASQGIDGIVLAPLDEKALVRPVEEAARLNVPTVIMDSALASDQIVSFVATDNYKGGELGADALGQAMNGKGKILLLRYAEGSASTTAREAGFLARREAAWPGLELVSSDQYAGATRDTAKRAAENLLNRYGRDLDGMFVVNESSTSGMLLALQDAGLAGKVKFIGFDSNQAFVDAMRKGELHGFVLQNPFRMCGLAVEALVDHLQGRPVAKLVDTGVSVVTPANLDAPEMQALIKPPLDQYLKPGE*