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PLM4_65_b1_redo_sep16_scaffold_963_15

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(26765..27892)

Top 3 Functional Annotations

Value Algorithm Source
Efflux pump, RND family, membrane fusion protein bin=GWC2_Pelobacter_58_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 372.0
  • Bit_score: 355
  • Evalue 3.40e-95
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 375.0
  • Bit_score: 344
  • Evalue 2.90e-92
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 375.0
  • Bit_score: 449
  • Evalue 4.20e-123

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Taxonomy

R_Acidobacteria_60_20 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGACCAGGCGCACATGGCTGGTGTTGATGATCGCGACCGGCGCCGTGTTCGGGCTGGGAGCGGTCAAGGTGCTGCAAATCCAGGCGGCGATCGCGCAGGCGTCGTCCTTCCAGCCTCCGCCGGAGGCCGTCACGACGATCCTGGCGCGCTCGGATCGGTGGCCGACGACGCTCGCGGCCGTCGGTACGGTGCGAGCCGTCCGCGGCGTCACGCTGAGCGCCGACCTGCCGGGCGTCGTAGAGGCAGTGGCCTTCGACTCCGGCCGCCCGGTGCGGGAGGGCGAGCTGCTCGTCCGCCTCGACGCGCGCCAGGAGCGGGCGCAGCTCGCCGCGGCGGAGGCGCAGCGCGAGCTCGCGCGACTGAACCTCGAGCGCGTGCGCGGTCTCGTGGCGCAGGGGATCGTGGCCCAGGCCGAGCTCGACCGCCTGAGTGCGGAGCACAAGCAGGCGGACGCGCGGGTGGGCGAGATCCAGGCGACCATCGAGCGCAAGCAGATCCGCGCCCCGTTCTCGGGGGTGCTCGGGATCCGGCAGGTGGACCTCGGGCAGTACCTGAACGCGGGCGATCCGATCGTGCCGCTGCAGGCGCTCGACCCGATCTACGTGAACTTCTCGGTCCCGCAGCAGCAGGTCGGCGAGGTGCGCGTCGGACGCGAAGTGCGCGTGAGCGTCTCCGGAATCGACGGCCCCGAGATGGCGGGCCGCATCAGCGCGGTCGACTCGGTCGTGGACGCGGCCACCCGCAACGTGCAGGTCCAGGCGACGCTCGCCAACCCGGAGGGGGAGCTCCACCCCGGGATGTTCGTCGAGGCGCACGTCGTCACGGGCGAGGCAGCGCAGGCGCTGGTGCTGCCGGCCTCGGCAATCAGCTACGCGCCCTACGGGGATTCCGTGTTCGTCGTCTCGGCGGCCGACGCGAAAAACGCCGAGGCGGGGAAGGTCGTGACCCAGCAGTTCGTCAAGCTCGGCGGGACGCGCGGCGACCAGGTGGCCGTGCTCTCGGGGATCGAGGCCGGCGCCGAGGTGGTGAGCTCGGGGGCGTTCAAGCTCCGGAGCGGCGCGGCGGTGCGGGTGAACAACGAGGTGCAGCCCGCCAACGACCCGCGGCCGCGGCCTGAGGACAACTGA
PROTEIN sequence
Length: 376
MTRRTWLVLMIATGAVFGLGAVKVLQIQAAIAQASSFQPPPEAVTTILARSDRWPTTLAAVGTVRAVRGVTLSADLPGVVEAVAFDSGRPVREGELLVRLDARQERAQLAAAEAQRELARLNLERVRGLVAQGIVAQAELDRLSAEHKQADARVGEIQATIERKQIRAPFSGVLGIRQVDLGQYLNAGDPIVPLQALDPIYVNFSVPQQQVGEVRVGREVRVSVSGIDGPEMAGRISAVDSVVDAATRNVQVQATLANPEGELHPGMFVEAHVVTGEAAQALVLPASAISYAPYGDSVFVVSAADAKNAEAGKVVTQQFVKLGGTRGDQVAVLSGIEAGAEVVSSGAFKLRSGAAVRVNNEVQPANDPRPRPEDN*