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PLM4_65_b1_redo_sep16_scaffold_1013_22

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(25139..25951)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 250.0
  • Bit_score: 218
  • Evalue 6.10e-54
rluB; 23S rRNA pseudouridylate synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 271.0
  • Bit_score: 213
  • Evalue 5.60e-53
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 271.0
  • Bit_score: 213
  • Evalue 2.80e-52

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 813
ATGCTCGAGGGGCGCGTCACGCGCAACGGCGAGGCCGTGCGCGAGCTCGGCACGAAGGCGGATCTCGAGAAAGACGACGTCCGAGTCGACGGCGTTCGCGTCAAGGCCCCGAAGGGGCACGTCTACCTGGTGCTCAACAAGCCGCGCGGCGTCGTCACCACGCGCAGTGACCCCGAGCGGCGGCAGACCGTGATGGACCTGGTGCCCGCGGTGGCGGGGCTGTTCCCGGTCGGCCGGCTCGACGTCACCACCGAGGGCCTGATCCTGCTGACGAACGATGGAGCATTCGCCGAGCGCGTCTCGCATCCCCGCTACGAGGTGCCGCGCGTCTATCACGCCAAGGTGCACCGTGTCCCCGACGCGCTGGCGCTCCAGCGCCTGCAGCAGGGCGTGAAGGTCGACGGCGACTTCATGGCGGTGGACCGCGCGCGCGTGATCGACGCCGACAACAACGCCTGGGTGGAGGTGACGCTCCACGAAGGCAAGCAGCACGAGGTCAAGCGGCTGCTCGAAGCGGTCGGCCACCCGGTGTCCAAGCTGCGCCGCGTGGCGATCGGGCCGGTCACCTCGCGTGGGCTCGAGCCCGGGGAGTTCCGGGCGCTGCTGCCCGCGGAGATCGAGGGGCTGCGCCGCGGTCGCCCGGCGAACGCCCGCAACATGCGGCGCGTGGCGAGCCGACGGCCCCGCTCCCGGCCGGGCGGCCGTCGCCGCGCGCCTTCGCCACCCGATCGGGCCATGGACCGCCGGGCGTCTGCAGGGCCGCAGGCGAAGCCGGCCGAGCGCCGCGCGCCACGGCGAGGGGGAGCGCGATGA
PROTEIN sequence
Length: 271
MLEGRVTRNGEAVRELGTKADLEKDDVRVDGVRVKAPKGHVYLVLNKPRGVVTTRSDPERRQTVMDLVPAVAGLFPVGRLDVTTEGLILLTNDGAFAERVSHPRYEVPRVYHAKVHRVPDALALQRLQQGVKVDGDFMAVDRARVIDADNNAWVEVTLHEGKQHEVKRLLEAVGHPVSKLRRVAIGPVTSRGLEPGEFRALLPAEIEGLRRGRPANARNMRRVASRRPRSRPGGRRRAPSPPDRAMDRRASAGPQAKPAERRAPRRGGAR*