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PLM4_65_b1_redo_sep16_scaffold_1233_29

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(26915..28207)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein involved in aromatic hydrocarbon degradation Tax=Caldithrix abyssi DSM 13497 RepID=H1XRQ1_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 433.0
  • Bit_score: 240
  • Evalue 1.80e-60
aromatic hydrocarbon degradation membrane protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 430.0
  • Bit_score: 220
  • Evalue 5.60e-55
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 426.0
  • Bit_score: 530
  • Evalue 1.20e-147

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Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGACTCTGGCCGTCCGAGATCGCGCGCTGCGGGCGCTCCTGGCGCTGCCGCTCCTGGCCGTTCCCGCTGCCGTCCAGGCGTCGGGCTTCGCGATCGAGAGCCAGGGCTCCCGGGCGATGGGCTTCGCGGGGGCCTACGTGGCGCAAGCCGCGGACCCCTCGGCGATCTTCTACAACGCCGCGGGCATCGGTTTCCTGAAGGGCAAACAGCTCTACGTCGGCGGCGCGCTCGCGGGGCTCTCGACCGACTTCACCGGATCCGGGCCGTACCCGCCCACGGGCACGCTCGAGCAGTCGAGCAACGGCCTCGCCATCCTCCCCTCGATCTACTACTCGCAGCAGGTGGGGGACAAGATGGTCGTCGGCCTCGGCGTCAGCCGGCCGTTCGGCACGCGCTCCGAGTGGCAGAACCCCGACGACTTCACCGGCCGCTACATCTGCCTCGAGTGCCAGATCGACTCGTGGTCGATCAACCCCACGATCGCATTCAAGCTCGCGGACCGTTTCTCGATCGGCGCGGGCGTCGACATCCGGCTCTCGAGCTTCAAGCTCTCGCGGCGCCTGATCGCCGACCCGAACCCCTTCCCCGAGCCCACCGACGTCGCCGAGCTGACGCTCGACAGCGGCACCGACACCGGGGTCGGCTTCAACGTCGGCCTGCTGGCGATGCCGACCGAGAACTTCTCGATCGGGCTCTCCTACCGTCACGAGGTGAAGATCGACCACGGCGCGCAGGCCAACTTCGTGCAGATCCTCACCGGGAACACCGTGCTCGACCAGGCGGTGGCGATCGCGCTGCCGGGCTCGCAGCCTGCAACCGTCAGCTTCACCTACCCGGCCAGCTTCGCGGCGGGTGTCGCGCTGCGGCGTGGCTACTGGACGATCGAGGCCGACTTCCAGTGGATGCTGTGGTCCAGCTTCGACGCCGTCACGATCAACTACGTCAACTCGCCGGCCTTCGACAGCGTGCTGCCGCAGGAGTGGCAGGACACCTGGCGCGGGGCGATCGGCGTCGAGTACCTGATCCGCGACGACTGGGAGGTGCGGGCCGGCTACGGCTACGACCACAGCCCGGCGCCCACGGAGACGATCTCGCCCTTCATCCACGACGCCGACCGCCACACCTTCGGCGCGGGCGGCAGCTGGAAGTACGAGAGCCTGCGCCTCGATTTCAACATGCGCTACGTGCTGTCCCAGACGAGCTCGACCCTCGGCATCAGCCGCTACGGCTACGACGGCAGCTACAAGTCGGGCAGCTTCCAGGTCGGCGCGTCCTTCGGGTATCGCTTCTAG
PROTEIN sequence
Length: 431
MTLAVRDRALRALLALPLLAVPAAVQASGFAIESQGSRAMGFAGAYVAQAADPSAIFYNAAGIGFLKGKQLYVGGALAGLSTDFTGSGPYPPTGTLEQSSNGLAILPSIYYSQQVGDKMVVGLGVSRPFGTRSEWQNPDDFTGRYICLECQIDSWSINPTIAFKLADRFSIGAGVDIRLSSFKLSRRLIADPNPFPEPTDVAELTLDSGTDTGVGFNVGLLAMPTENFSIGLSYRHEVKIDHGAQANFVQILTGNTVLDQAVAIALPGSQPATVSFTYPASFAAGVALRRGYWTIEADFQWMLWSSFDAVTINYVNSPAFDSVLPQEWQDTWRGAIGVEYLIRDDWEVRAGYGYDHSPAPTETISPFIHDADRHTFGAGGSWKYESLRLDFNMRYVLSQTSSTLGISRYGYDGSYKSGSFQVGASFGYRF*