ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1245_9

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(11171..11545)

Top 3 Functional Annotations

Value Algorithm Source
Cytidine deaminase {ECO:0000313|EMBL:CDM65507.1}; EC=3.5.4.5 {ECO:0000313|EMBL:CDM65507.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 124.0
  • Bit_score: 157
  • Evalue 1.10e-35
cytidine deaminase (EC:3.5.4.5) similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 124.0
  • Bit_score: 154
  • Evalue 1.40e-35
Cytidine deaminase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFE4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 124.0
  • Bit_score: 154
  • Evalue 5.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGTCACGCTCGCACGCGAGGCCCGCGAGCTGGCCCACGCTCCCTATTCGGGCTTCAAGGTGGGCGCCGCGCTCAAGACGCGCGCGGGCGAGATCGTCACCGGCTGCAACCTCGAGAATGCCTCCTACGGGCTCACGATGTGCGCGGAGCGCGTCGCGGTCTTCAAGGCGGTGTCGGAGGGGTTGTCGGACTTCGAGGCCATCGTGGTGGTCGCCGACTCGAAGCAGCTGACGGCGCCGTGTGGGCCGTGCCGGCAGATTCTGTGGGAGTTCTGCGGCGACATCCTGGTGCACATGTCGAACTCCAAGGGACGCACGCGGGTGATGCGGCTGCGCGACCTGCTGCCGCTGCCTTTCGACGGGCGCAGCCTGTGA
PROTEIN sequence
Length: 125
MVTLAREARELAHAPYSGFKVGAALKTRAGEIVTGCNLENASYGLTMCAERVAVFKAVSEGLSDFEAIVVVADSKQLTAPCGPCRQILWEFCGDILVHMSNSKGRTRVMRLRDLLPLPFDGRSL*