ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1704_14

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(17913..18572)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q5T6_CALOW similarity UNIREF
DB: UNIREF100
  • Identity: 27.3
  • Coverage: 227.0
  • Bit_score: 78
  • Evalue 8.00e-12
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 27.3
  • Coverage: 227.0
  • Bit_score: 79
  • Evalue 1.00e-12
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ADQ05495.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.3
  • Coverage: 227.0
  • Bit_score: 78
  • Evalue 1.10e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldicellulosiruptor owensensis → Caldicellulosiruptor → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 660
GTGGTCGCCCCCGTTGTGGTCGCGTCGCTCGCGGCTGCTGCCCTCGCACTCCTGCTGCCGGCACGCTATCGCGCCACGGCGCTGGTGCACGTGGAATGGAGCGTAGCTGCCGAAGGGTTGCCCGGCGACGCAGGCCTCGATCTGGCCGCGCGGCGCAACCTGGCGGTGCGACGCCGGATTACCGAGACGGCCCTGCTGGAGCGCGCTATCTCTGAGACAGCTCCCTACGCGGCCGCGAACCGAGTCTCGGCCCCCGCCGCAGCACAGGTCGAGCGGCTGCGTTCCGACCTGCGGGTTCGGCCCATGTCGACGAGCTCCTTCCTCGTCGAGTTCGAGCACCGCGATCCCGTGACGGCCGCGTTGGTGCCCAACGCGCTGGCCAAGGCGCTCGTCGAGCAGGATGGGCCCGTGCGCTTCGAGCTGTTGAGGTCGGCGATTCCGCCCGCTGCGCCGGAGTCGTCGGATCCCGTGTGGTTCGGCTTCGCTGGCGCCGTCGCCGGCCTGCTGCTGGGCCTTGGAGCCGCGCTGGTGGCAGAGCATCGCGACCACAGCGTCAAGGGTCCCGAGGACCTGGAGGACATCCTGCCGGTGCCGCTGTTGGCGACGCTCCCCGAGGTCCGGGAGCGCGACAAGCGCCCTTCTCGCGACGCGGGCCTATAG
PROTEIN sequence
Length: 220
VVAPVVVASLAAAALALLLPARYRATALVHVEWSVAAEGLPGDAGLDLAARRNLAVRRRITETALLERAISETAPYAAANRVSAPAAAQVERLRSDLRVRPMSTSSFLVEFEHRDPVTAALVPNALAKALVEQDGPVRFELLRSAIPPAAPESSDPVWFGFAGAVAGLLLGLGAALVAEHRDHSVKGPEDLEDILPVPLLATLPEVRERDKRPSRDAGL*