ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1768_21

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(25927..26508)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Anaeromyxobacter sp. (strain K) RepID=B4UK60_ANASK similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 185.0
  • Bit_score: 118
  • Evalue 6.20e-24
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 185.0
  • Bit_score: 118
  • Evalue 1.70e-24
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 183.0
  • Bit_score: 140
  • Evalue 1.60e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGACCTTCGCGGCGCTCGTTTCAGTGGCCGATGCCGAGGTGGCCCGGCGCATCACGGCTCGGGGCGAGGACGCCCCGGTCCACGAGGCCGAGCTGTGCCGTCGCTACCTGAACCGAGCCAGGCTGTATGGGCTCAGGCACTTGCGGTTCGATGTAACGGCGGCCGAGGATCTGGCACAACAGGTCATGATCGTTGTGATCGAGGCGCTGCGAGCGGGCCGAGTGGAAGACCTCGAGCGGATCGATCGTTTCATGCTCGGCAGTTGCCGCAACGTGGCTCACTCGATGCGTCGAGACCGCGAGCGTCAGGGCGAGGTGACGCGACGGCTGTCCTTCGAAGTTGCGAGTGCGGTCGTGCCGCCGTGGGATCGAGTCGAGGGCCGTCGGGTCGAGGACTGCCTGGCCGGCCTGGCGCCCCGCGAGTCGCGGGTGCTGCAGCTCCTCTTCCAGGACGAGCGCACGGCGGCCGAGGTCGCTTCTGAGCTGGGCACGACGGCGGGTAACGTGCGGGTGATCCGCCACCGGGCGATCATTCAGCTGCGCGAGTGCGTCGCGGCAGCAACGCAGGGTCGAGCGTCATGA
PROTEIN sequence
Length: 194
MTFAALVSVADAEVARRITARGEDAPVHEAELCRRYLNRARLYGLRHLRFDVTAAEDLAQQVMIVVIEALRAGRVEDLERIDRFMLGSCRNVAHSMRRDRERQGEVTRRLSFEVASAVVPPWDRVEGRRVEDCLAGLAPRESRVLQLLFQDERTAAEVASELGTTAGNVRVIRHRAIIQLRECVAAATQGRAS*