ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1981_1

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(2..2296)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 764.0
  • Bit_score: 907
  • Evalue 6.70e-261
Transcription-repair-coupling factor Tax=uncultured bacterium 293 RepID=E3T603_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 764.0
  • Bit_score: 907
  • Evalue 4.80e-261
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 818.0
  • Bit_score: 518
  • Evalue 3.00e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium 293 → Bacteria

Sequences

DNA sequence
Length: 2295
GTGAAGCTGCCCGCCTGGCTCGCTCCGCTCGCGGAGCTCCCTCACGTCCTGGAAGCCCGAGGGCGGCTCGCGGCCACGGGCCGCGTCGATCTCGCCGGCCCGTCGGGGGCGCTGCGCGCCTTCCTTCCGATGCTGCTCGCGGACGGGCCGCTGCTGCTGCTGGTGGCGCGCGAGCGCGACGTCGAGGAGACCGCCCAGGACCTGCGCACGCTCGCGAGCGCCGCGGGCCTCGAGGGCCCGGTCCTGGCGTTGCCGGCTCCCGGGCCGCCGCCGTTCCGCGGCCTGCCGCGCCACGCGGACGCCCAGGCGCGCCGCGCAGCCGCGCTGCACAAGGCGAGGGCGGCCCGCGTCGTGGTCGCGTCGCCTTTCGGCCTGCTGCGCCCGAGCCTCGCGCCGCATCTGCTCGCGACGCGCGTGCTCAACGTGCGCGTCGGCGACGAGATGACACCCGAGATCCTGCTCGAGGCGCTCGACGAGGGCGGCTACGCACGCGAGGACCCGGTCACGGCCCCGGGCCAGGTGGCGCGCCGGGGCGGCATCCTCGACGTCTTTCCCTCGGACGCGACGGAGCCGGTGCGGATCGAGCTCTTCGCCGACACCGTCGAGAGCCTGCGCCGCTTCGACCCCGACACGCAGCGCGCGACGGCGGCGATCGAGTCCTTCGAGACGCTTCCGCTCACCGATCTGTTCGCCACGCGCTCGCTGCTCGCGGCGCTGCCGGACGTCCTGAAGCAGCGTTTCGCGGACCGGCGTGAGCTTCCCGCGTTCCTCGACGCGCTCGAGCGCGGCCTCGCACCCGACGGGCTCGCCGATCTGCTGCCGCTCGTGCCGGGCGCGACCGTCGCGCCGTGGCGGCACATGCCCGCCGCCACGGTCGTCCTCGTCGAGCCGGAGGCCGTGCAGCAGGAGGCGGAAGGACTCCTGGCGCGGGCGCGCGAGGACCGCGCCCGTCGCAGCGAGGGCCTGCAGCCCGAGGTCGGAGAAGCGCTCATAGCACCTGTGGCGTTCGCGGAGTACCTGGCCGGAGTGCCCGTCGTCCGCGTGCGCGAGGTCCAGACCGACGGCGAAGGCTTCCACGTCGCCGCACGTCCCGCCCCGAGCTACGCGGGGGACGTGACGCGGCTCGCCGCCGACCTGCGGGAAAGCCCGGCCACGGCGGTAGTCTTCCTCGGCAACCAGGGGCGTGCCGACCGGCTGCGCGATGTGCTGCGTGACGAGGGTCTCGCCGTCGGAGAAGAGACGCGGGTCCTCACCCGCGTCGGCGCCCTGTCGCGCGGATTCGAGGTCCCGGAAGCCGGGCTCACGCTGCTCGCCGACGGGGACGTCTTCCCCGAGGAGGTGCACCTACACGCGCGCGGCCGCCGGCGCGGGCTGCGCTCGTTCCTCTCCGACTTCCGGGACCTGAAGGTGGGCGACCTGGTCGTCCACGAGGAGCACGGCATCGGCCGCTTCCTGGGCCTCGAGACCCTCCAGGTCGGTGGCGCGTCGCGCGAGCTGATGGTGCTCGGCTACCAGGCCGGCGACAAGCTCAAGGTGCCGGTCGAGGCGTTCGACCGCATCCAGAAGTACTCGAGCGGCGAGGGGGCGCGCCCGCACGTCGACCGGCTCGGCAGCGGGGCGTGGGAGAAGACCAAGACCCGCGTGAAGAAGGCCATGCGCGACATGGCCCAGGAGCTGCTCAAGCTGTACGCCGAGAGGAAGGCGCGCCCGGGGCACGCCTTCACCGGGGAGAGCCCCTGGCAGCGCGAGTTCGAGGCGGCATTCGAGTACGACGAGACCCCCGACCAGGCCCAGGCGATCGCCGAGGTGGCCGCCGACATGGCAGCGGCCGGGCCGATGGACCGCCTGGTGTGCGGCGACGTCGGCTACGGCAAGACCGAGGTCGCGATGCGCGCCGCCATGCGCGCCGTGCTCGACGGCAAGCAGGTCGCGGTGCTGGCGCCCACCACCGTGCTCGCGTTCCAGCACTGGAAGACCTTCCGCAAGCGCTTCGCGCCGTTCCCGGTCACGGTCGAGATGGTCTCGCGCTTTCGCTCGCCGAAGGAGATCAAGGCCGTGCTCGCGCGCGTGGCCGCGGGCGCCGTCGACGTGCTGATCGGCACCCACCGCATCCTGTCGAAGGACGTGGTGTTCCGCGACCTCGGGCTGCTGGTGGTCGACGAGGAGCAGCGCTTCGGGGTGGCGGCGAAGGAGAAGCTCAAGCAGCTCAAGACGACGGTCGACTGCCTGACGCTGTCGGCGACGCCGATCCCGCGCACGCTGCAGATGGGCCTCTCGGGGATCCGCGACATGTCG
PROTEIN sequence
Length: 765
VKLPAWLAPLAELPHVLEARGRLAATGRVDLAGPSGALRAFLPMLLADGPLLLLVARERDVEETAQDLRTLASAAGLEGPVLALPAPGPPPFRGLPRHADAQARRAAALHKARAARVVVASPFGLLRPSLAPHLLATRVLNVRVGDEMTPEILLEALDEGGYAREDPVTAPGQVARRGGILDVFPSDATEPVRIELFADTVESLRRFDPDTQRATAAIESFETLPLTDLFATRSLLAALPDVLKQRFADRRELPAFLDALERGLAPDGLADLLPLVPGATVAPWRHMPAATVVLVEPEAVQQEAEGLLARAREDRARRSEGLQPEVGEALIAPVAFAEYLAGVPVVRVREVQTDGEGFHVAARPAPSYAGDVTRLAADLRESPATAVVFLGNQGRADRLRDVLRDEGLAVGEETRVLTRVGALSRGFEVPEAGLTLLADGDVFPEEVHLHARGRRRGLRSFLSDFRDLKVGDLVVHEEHGIGRFLGLETLQVGGASRELMVLGYQAGDKLKVPVEAFDRIQKYSSGEGARPHVDRLGSGAWEKTKTRVKKAMRDMAQELLKLYAERKARPGHAFTGESPWQREFEAAFEYDETPDQAQAIAEVAADMAAAGPMDRLVCGDVGYGKTEVAMRAAMRAVLDGKQVAVLAPTTVLAFQHWKTFRKRFAPFPVTVEMVSRFRSPKEIKAVLARVAAGAVDVLIGTHRILSKDVVFRDLGLLVVDEEQRFGVAAKEKLKQLKTTVDCLTLSATPIPRTLQMGLSGIRDMS