ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_2719_17

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(15510..16343)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 282.0
  • Bit_score: 239
  • Evalue 2.60e-60
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 280.0
  • Bit_score: 235
  • Evalue 1.80e-59
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 276.0
  • Bit_score: 403
  • Evalue 1.50e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGAAGTTCGCGAAGGCCCACGGCCTTGGCAACGACTTCATCCTGGTGGCGGCGTCCGAGGAACCCGAAGACCCCTCGGCCTGGGCCGTGCGTCTGTGCGATCGCCACCGAGGCATCGGAGGCGACGGCGTCGTGCTCCACGCGCCCACGCCGGACGGTGTCTCCTTCCGGCTGATCAACGCCGACGGCTTGCCCGGCGAGATCTCTGGCAACGGCCTGCGCTGCCTCGCGGCCCTCGCGGTGCGGAGCGGCTGGGCGCCGCTCCGCCACGTGGTGAGCACCGTCGTCGGGCCGAAGGCCGTCGAGGTCGCGAAGGTCGCGGGAAGCCGCTACAGCATCCTGACAGACCTCGGGGCGCCCGCTCTCGGCAGCCGGGACGTGCCGGTGGCGCTCGAGCCGCCCGCGGCGACCGTCATCGACCACTCGCTCGAAGCGGGCGGAAGGCGCGTTCACGTCACCGCGACCTCGATGGGCAATCCTCACTGCGCGGTGTTCCTGGAGCAGGAGGCGGACGACGCCCTGCTGTGCGAGCTCGGCCCCCTCCTCGAGCGCCACCCCTTCTTCCCGAAGCGCACCAACGTCGAGTTCGTCACGGTGCTCGGGCCAGGCGAGATCCGCGTGCGCTTCTGGGAGCGCGGCGTCGGCTACACGATGGCGTCGGGAACGGGCTCCGCGAGCGCCGCGGTGGCTTCGATCATCACGGGCCGCACCGGCCGCAAGCTGAAGGCCGTCTGCGACGGCGGTACGCTCGAGATCGACTGGCCCGAGGGCGGCAGCGTCAGGCAGACCGGAGAAGTCGAGATCCTCTTCGACGGTGACTGGCTGGCTCGCTAG
PROTEIN sequence
Length: 278
MKFAKAHGLGNDFILVAASEEPEDPSAWAVRLCDRHRGIGGDGVVLHAPTPDGVSFRLINADGLPGEISGNGLRCLAALAVRSGWAPLRHVVSTVVGPKAVEVAKVAGSRYSILTDLGAPALGSRDVPVALEPPAATVIDHSLEAGGRRVHVTATSMGNPHCAVFLEQEADDALLCELGPLLERHPFFPKRTNVEFVTVLGPGEIRVRFWERGVGYTMASGTGSASAAVASIITGRTGRKLKAVCDGGTLEIDWPEGGSVRQTGEVEILFDGDWLAR*