ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3731_1

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 1..342

Top 3 Functional Annotations

Value Algorithm Source
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=CNBR_ACIDO species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 95.0
  • Bit_score: 154
  • Evalue 3.50e-35
30S ribosomal protein s19 similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 87.0
  • Bit_score: 147
  • Evalue 1.60e-33
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 109.0
  • Bit_score: 184
  • Evalue 5.80e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 342
TCGCTGAAGAAGGGCCCGTTCGTGGACGACCACCTGCTGAAGAAGGTGGAGGCGATGAACTCCGCCGGGGAGAAGAAGGTCATCAAGACCTGGTCGCGCCGCTCGACCGTGATCCCCGAGATGGTCGGTCACACGCTCGCCGTCTACAACGGCAAGAAGTTCGTCCCGGTCTACGTGACCGAGAACATGGTCGGGCACAAGCTCGGCGAGTTCTCGCCCACGCGGCAGTTCAAGGGCCACTCCTCGAAGGTCGAGAAGGTGGTCACCAAGGCCGGAATGCCGGGCGCGCCCGGGGCTCCGGCAGCGGCGGCTCCGGCGGCGGCTCCGCCGGCGAAGGGCTAG
PROTEIN sequence
Length: 114
SLKKGPFVDDHLLKKVEAMNSAGEKKVIKTWSRRSTVIPEMVGHTLAVYNGKKFVPVYVTENMVGHKLGEFSPTRQFKGHSSKVEKVVTKAGMPGAPGAPAAAAPAAAPPAKG*