ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3893_5

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 2878..3597

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 235.0
  • Bit_score: 177
  • Evalue 2.30e-42
Pseudouridine synthase {ECO:0000313|EMBL:ADO71995.1}; EC=5.4.99.- {ECO:0000313|EMBL:ADO71995.1};; Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:EAU62807.1}; EC=5.4.99.- {ECO:0000313|EMBL:EAU62807.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 235.0
  • Bit_score: 177
  • Evalue 1.10e-41
Pseudouridine synthase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08QQ0_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 235.0
  • Bit_score: 177
  • Evalue 8.10e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stigmatella aurantiaca → Stigmatella → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCCGGACAGCGAGACGCCGCTCACCCTGCTCCACGACGACGGCGCGCTCGTGGCCGTGGCGAAGCCGCCAGGCGAGCCGGTGATCGCGGCACGCGGCGAACCGCCCGAGGCGTGTCTGCAGAAGCGACTGGAGCGGCAGCTCGGGCGCCGCGTGTTCGTGGTGCATCGCATCGATCGCGACGCCTCCGGCGTCGTCGTCTTCGCCCTCGACGCGGCTGCTCACCGCGCAGCGAGCCTCGCCTTCGAGCATCGGCGCGTCGACAAGCGGTACCTCGCCATCGTGGCGGGAGCCCTGGAGCCCGCCGAGGGCAGGTTCGAGACGCCGCTGCATTCGGCCCGCAAGGGGAAGACGCGGCCCGCGCGCACGGGTGAGGCCGGGGCCCAGGCCGCGGTCACCGACTACGCCACGCGCCGGCGCTTCACGCTCGACGACCGCGTGGTGAGCCTGGTCGAGGCGCGACCGCAGACCGGCCGCCACCACCAGATCCGCGTCCACCTGCGCGCGGCGGGCGCGCCGATCCTGTTCGACCCGCTCTACGGCCGCGGCCTCATGCCCACGGCGCTCTCGGAGGCTCCTTGCTCGCGGCTCGCCCTGCACGCCGAGCGCGTCGAACTGAAGGAGGAGGACGGCAGCCCGCGCCTCGCGGTCGAAGCTCCGCTTGCGGCCGACCTCGAGGCGCTCGTCGCGTGGCTCGAGGCCCACGCGCGCGCCGAGTGA
PROTEIN sequence
Length: 240
VPDSETPLTLLHDDGALVAVAKPPGEPVIAARGEPPEACLQKRLERQLGRRVFVVHRIDRDASGVVVFALDAAAHRAASLAFEHRRVDKRYLAIVAGALEPAEGRFETPLHSARKGKTRPARTGEAGAQAAVTDYATRRRFTLDDRVVSLVEARPQTGRHHQIRVHLRAAGAPILFDPLYGRGLMPTALSEAPCSRLALHAERVELKEEDGSPRLAVEAPLAADLEALVAWLEAHARAE*