ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_8405_3

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 1165..2526

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X5H7_DESRD similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 455.0
  • Bit_score: 363
  • Evalue 2.00e-97
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 455.0
  • Bit_score: 363
  • Evalue 5.60e-98
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 447.0
  • Bit_score: 427
  • Evalue 2.00e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
GTGACCGTGGCTGGGGGGCGTTCGATCCTGCTCGTCGAGGACCACGCCGAGAGCCGCGCCAGCCTCGCCTACGTCCTCGAGAAGCGCGGCGAGACCGTTCACCAGGCGGCCAATGGCCGGGCGGCGCTGTCCGCCGCGCGGCATGAGACGCTTCACGCGCTGATCTTGGACCTGAAGCTCCCCGACATGGACGGCCTCTCCGTGCTCGACGCCGTGCTGCAGGAGGCTCCCGGGCTGCCCGCGATCGTCGTCACCGGCTTCGGTACGATCGACTCCGCCGTCGAGGCGATGAAGCGCGGCGCGTCGGACTTCCTGACCAAACCCATCCAGGTCGAGAACCTGCTCGCCGCCCTCGACCGTAGCATCGAGCGCGCGGGCGCCAGCGGCGCCGTCTCAACTCCGCCCTCCCTCTCCAGCGCAGAGATGGCCAAGCTGGGCATCGTCGGCGAATCGCGGGCCATGCAGGAGCTGTTCGACACGCTGAAACGCATGGCCCCCTACGACTCCACCGTGCTGATCCTGGGTGAGAGCGGCACCGGGAAGGAGTTGATCGCCCGGGCCCTGCACGCGCTTGGCTCGCGCGCGGCCGGGCCGTTCGTCCCGATCAACTGCGCGACCCTTTCGGACCAGCTCCTGGAAAACGAGCTGTTCGGACACGAGAAAGGCGCCTTCACGAGCGCGGACCGACCCAAGCCCGGCGTCATGGAGACCGCCGACGGCGGCACGCTGTTCCTGGACGAGGTCAGCGAGATGGGCCTGGGCTGCCAGGCGAAGTTGCTGCGGGCGATCGAGCGCCGCGAGTTCCGGCGGGTGGGCGGGACGCGCAAGATCAAGGTGAACCTGCGCGTGGTCGCCGCATCCAACGTCAGCCTCGAGGACTCGGTGGCGGCCCACCGGTTCCGGCCCGACCTGTACTACCGGCTCAAGGTCCTGAGCCTCCGGGTGCCGCCGTTGAGGGAGCGGAAGGAGGTCATCCCGGTCCTCGCCCAGCGCCTGCTCGACGAGGTGGCGCGCAACGCCCACGTCCCGCCGAAGCGCCTCGCGACCGAGGCGCTGGCCCAGCTCGGGCGCTACGACTGGCCCGGCAACGTTCGCGAGCTGCGCAACGTGATGGAGAGCGTGCTCATCGGCCCGAAGAGGACGATCGACGTCGAAGACCTCCCGGCGAACGTCCGGAGGGTTGAGGCCGGGGTCATCCAGGTCACGGTGGGCACCCGCCTGGACGAGGTGGAGCGGCAGGTGATCCAGCGGACTCTCGACTCCTATCCCACGGTGAAGGAGAGCGCGCGCGTCCTCGGCATCGGGCTGCGGACGCTTCACAGCAAGATCCGCCGCTACGGCCTGCGCAGCCGGCGGTCCTAG
PROTEIN sequence
Length: 454
VTVAGGRSILLVEDHAESRASLAYVLEKRGETVHQAANGRAALSAARHETLHALILDLKLPDMDGLSVLDAVLQEAPGLPAIVVTGFGTIDSAVEAMKRGASDFLTKPIQVENLLAALDRSIERAGASGAVSTPPSLSSAEMAKLGIVGESRAMQELFDTLKRMAPYDSTVLILGESGTGKELIARALHALGSRAAGPFVPINCATLSDQLLENELFGHEKGAFTSADRPKPGVMETADGGTLFLDEVSEMGLGCQAKLLRAIERREFRRVGGTRKIKVNLRVVAASNVSLEDSVAAHRFRPDLYYRLKVLSLRVPPLRERKEVIPVLAQRLLDEVARNAHVPPKRLATEALAQLGRYDWPGNVRELRNVMESVLIGPKRTIDVEDLPANVRRVEAGVIQVTVGTRLDEVERQVIQRTLDSYPTVKESARVLGIGLRTLHSKIRRYGLRSRRS*