ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_12468_1

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(75..1076)

Top 3 Functional Annotations

Value Algorithm Source
integron integrase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 328.0
  • Bit_score: 412
  • Evalue 3.60e-112
integron integrase similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 324.0
  • Bit_score: 397
  • Evalue 2.60e-108
Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 305.0
  • Bit_score: 421
  • Evalue 6.30e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1002
GTGTCGGAGGGAGAGCCCCAAGAAGGTCCGTCGCCCCAGCCGCAGCCACGGCTCTTCGAGCGCGTGCGACTCGCGATCCGCGGGCGCCACTACAGCCCCCGCACCGAGAAAGCCTACCTGGGCTGGATCCGGCGCTACATCCTGTTTCACGGCAAGCGTCACCCCGACGCGCTCGGCGTCCCGGAAGTGACCGCCTACCTCGCGCATCTCGCGATAGCCGGGCACGTGAGCGCGTCCACCCAGAACCAGGCCTTCAGCGCGATACTGTTCCTGTATCGTGACGTGCTCGGCCGCGAGCTCTCCGGACTCGACGACACCCCGCGCGCCAAGCGCCCCATCCGCCTGCCGCTGGTGCTCGCGCGGAGCGAGGTGCAGGCCGTGCTCCAGCACCTGGGGGGCGTTCCCTGGCTGATGTGCTCGCTCATGTACGGCAGCGGCTTGCGCCTGCTCGAGTGCTGCCGGCTCCGCGTCAAGGACGTGGACTTCCACCGCTCCGAGATCCTCGTCCGCGACGGCAAAGGCCGCAAGGACCGCCTGACGGTGCTGCCCGCCCGCCTCGTCCCGGTCCTCGGGCAGCACCTTGAGCGCGTCGAGCGACAGCACCAGCGCGACCTCGAAGGCGAAGCCGGTTACGTGGCCCTGCCCGACGCCCTCGCCCGCAAGTACCCGAGCGCTCCCCGCGAATGGGCCTGGCAGTGGATCTTCCCGGCCAGGAGGCTGCACGTCGACGCCGCGACCGGCGAAAGGCGCCGTCACCACCTCCATGAGTCCCTGCTCCAGCGCTTGTTTGCGGCCGCGGTGCGGGATGCCCGCCTCACCAAGCCGGCGACCTGCCACACCCTGCGGCACTCCTTTGCCACCCACCTCCTGGAGACCGGCTACGACATCCGGACCATCCAGGAGCTGCTCGGCCACAGCGACGTCTCGACGACCATGGTCTACACCCACGTCCTCAACCGGGGCGGCCGCGGCGTCCAGAGCCCGTTCGATCTCATCGCGTGA
PROTEIN sequence
Length: 334
VSEGEPQEGPSPQPQPRLFERVRLAIRGRHYSPRTEKAYLGWIRRYILFHGKRHPDALGVPEVTAYLAHLAIAGHVSASTQNQAFSAILFLYRDVLGRELSGLDDTPRAKRPIRLPLVLARSEVQAVLQHLGGVPWLMCSLMYGSGLRLLECCRLRVKDVDFHRSEILVRDGKGRKDRLTVLPARLVPVLGQHLERVERQHQRDLEGEAGYVALPDALARKYPSAPREWAWQWIFPARRLHVDAATGERRRHHLHESLLQRLFAAAVRDARLTKPATCHTLRHSFATHLLETGYDIRTIQELLGHSDVSTTMVYTHVLNRGGRGVQSPFDLIA*