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PLM4_65_b1_redo_sep16_scaffold_19731_5

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(3483..3752)

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family Tax=Methylomicrobium album BG8 RepID=H8GMR7_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 79
  • Evalue 1.50e-12
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:EIC29469.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 79
  • Evalue 2.10e-12
AbrB family DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 89.0
  • Bit_score: 66
  • Evalue 2.80e-09

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Taxonomy

Methylomicrobium album → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGCCTGCCGCGACACTCACCGAGAAGGGCCAGATCGTGATTCCAGCCGAGATCCGTGCACGCTACCAGCTCACGCCGGGCACCCAGGTCGAGTTCGCAGACGAGGGCGGCAGCATCCGCCTGGTCGTCCGGCGGAGAGTGGCTCGATCCAACCCGGTGGCCGGCTACGGGATGATCAAGATCAAGCCCAGGCGCGGGCGTAAGGCTGCGCGCAGGCTGTCGGACTTCGACCCTGCGGCATTGCTCGGGCTGGGCCGGAGCAGGGCATGA
PROTEIN sequence
Length: 90
MPAATLTEKGQIVIPAEIRARYQLTPGTQVEFADEGGSIRLVVRRRVARSNPVAGYGMIKIKPRRGRKAARRLSDFDPAALLGLGRSRA*