ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_24310_3

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 2127..4586

Top 3 Functional Annotations

Value Algorithm Source
Smr protein/MutS2; K07456 DNA mismatch repair protein MutS2 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 847.0
  • Bit_score: 542
  • Evalue 4.30e-151
MutS2 family protein similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 826.0
  • Bit_score: 496
  • Evalue 1.30e-137
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 871.0
  • Bit_score: 624
  • Evalue 2.10e-175

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2460
GTGAACGCCAACTCATTCAAAGTACTGGAGTTCGACCGTATTCGGGCGCTCCTGCTGCAGCAGGTGGGCTCTGCTTTGGGGCGCGAACGCCTCGAGGGGCTGCACCCGCTCGTCGAGCCCCAGGCTGTCCGGCTGGCGCTCGCCCGCACGGGCGAAGGCGTGGCGCTCCTGAAAGCGGTCGGGCGGCAGCCGTACCACGACCTCCTCGACCCGAGAGAGGCGCTGGCCGGCGCCCGTGTCCGCGGCTCCCACCTGGAGCCCCGCGCGCTCGCCGACGTCGCGTCCCTGGTCGAGGGCGGGGTCGAGATCGCGCGGCGCGTGGCCCGGGTCGAAGCGACGCCGGGGCTCGCCCGGCTGGCGTCGGAGGTCCGCGACACGAGCCCGGTCGCGGTGGCGATCCGGCGCGCACTCCTCCCGACCGGCGAGGTCGCTGACGATGCTTCACCCCGGCTGGCCGAGCTGCGCCGTGCGCTGCTGCGTCTCAAGGCGCAGCTCACGAGCGTGATGGAGGGCTATCTCCGCAGCCCCGAAAGCGAGCGGCTGCTGCAGGACCGCGTCGTCACGACGCGCAACGACCGCTACGTGCTGCTGCTGAAGGCCGAGCACAAGGGCCAGCTGCCGGGCATCGTCCACGGCACCTCCGGCTCCGGGGCGAGCCTGTTCGTGGAGCCCCTGCCCGCGGTCGAGCTCAACAACGACATCGTGGAGCTGCAGGACGAGGAGCGGCGCGAGGTCGTGCGGATCCTGCAGCAGCTCACGGCGCAGGTCGCGGAGCGGGCCGACGAGATCGAGGCGATGGCCCGGGTGCTCGGCGAGCTCGACGCTGTGCAGGCGATGGCGCTCTTGGCAGTGGCGATGGACGCCCACCCGCCCGAGATCGTCGAAGGAAAGGCGCCCGAGATCGAGCTCACCGACTCGCGCCATCCGCTGCTGATGCCGGAGCTCGCGGCGCGGCTCGGCATCACGCGGTCGAGCGAGCCCGTGCCCGTCAGCCTGCGCGTCGGCGGCACGAGCCCGGTGCTCGTGATCTCCGGGCCCAACACCGGCGGCAAGACGGTGGCGCTCAAGACCACGGGCCTTCTCGCGCTGATGGCGCAGTGCGGGCTTCACGTCCCCGCTGCCCCCGGCAGCCGCCTGCCCGTGTTCCGGCGCGTGTACGCCGACATCGGCGACGAGCAGTCGATCGCCGAGAACCTGTCCACGTTCTCCTCGCACCTCGCCGCGATCGTGGAGATGACCCGCGACCTGGCGCGGCCGGCGCTGGTGCTGCTCGACGAGGTGGGCGCCGGCACGGATCCCACGGAGGGCGGTGCCCTCGGAGTCGCGATCGTCGAGCATTTCCGGCGCGCGGGAGCCATGGTGCTCGCGACGACGCACCACGGGCTGATGAAGGCCTACGCCCAGTCGACGCCCGGCGTCGCGACGGCCTCCTTCGGCTACGACCCCGGGAACTACCGGCCGACATATCGCCTGACGCTCGGGGCGCCGGGCCGAAGTCTCGCGCTCGAGATGGCCGAGCGGCTGGGGCTGCCCGCCGAGGTCGTGGCCGACGCGCGGGCGCGGCGCGACGACAAGGAGCGGCAGGCCGAGGCGCTGCTGGCCCGGCTCGAGCGGGAGACGGCCGCGCTCGCTCAGGATCGTGAGCAGACGCTCGCCGCGAAGGCCGAAGCGGAGGGAACGCTGGCGCGCGTCGCGGCGCTGGAGCGCGAGCTTCAGGCGAAGAAGCGCCGCGAGGTGGAGCTTTTCGCGAAGGAGCTGAAGCGGCGCGGCGAGGACGCCGAGCGCAAGGCCGCCGAGGCGATCCGCGCGGCGGTCGAGACGCTCGAGACCGCCCAGAAGGCGGCCGCGGCAGCCCCTCGCGTGCGGCGCGAGGCGATCGCGGCGATCCGCGACGCTCGCGACGCGGTGCTGAAGGACCCCGAGCTCGGCCTCCCGGACGAGCCGGACGCCCCGGCGCTCGCGATCGCCGTGGGCATGCGCGTGCGGGTGAAGGCGATGGGCCTGACGGGCGAGGTGACGAGCGTGCACGGCCCCGAAGCCGAAGTCGCGGTCTCGGGCAAGCGCCTGCGAGTGGCCACGCACGAGCTGGTCAGCCTGGGCAACAAGCAACCCCAGGGGGCCTGGGGGGGCGGCGCCCCCCCAGCTCAAAGAACGCCAAGAGCAGCACCAGGCGTCTTTGGTGCTTCGGGCGAGGGTCGCCCCCCTACGAAGACCATTCCGCCCGAGGTGAACCTGATCGGCCTCACGGTCGAGGACGCGCGCGAGCGGGTGGACAAGCTGCTCGACGACGCCGCGCTCTCCGACCGCCACGAGATCCGGCTCGTCCACGGCTTCGGCGAGGGCAAGCTCAGGAAGGCGATCGCACAGATGCTCGAGAAGCATCCCCTCGTCTCCTCCTGGCGCCTCGGCGGGCCGAGCGAGGGCGGCGGCGGGGCGACGGTCGTGGAGCTCAAGGACTGA
PROTEIN sequence
Length: 820
VNANSFKVLEFDRIRALLLQQVGSALGRERLEGLHPLVEPQAVRLALARTGEGVALLKAVGRQPYHDLLDPREALAGARVRGSHLEPRALADVASLVEGGVEIARRVARVEATPGLARLASEVRDTSPVAVAIRRALLPTGEVADDASPRLAELRRALLRLKAQLTSVMEGYLRSPESERLLQDRVVTTRNDRYVLLLKAEHKGQLPGIVHGTSGSGASLFVEPLPAVELNNDIVELQDEERREVVRILQQLTAQVAERADEIEAMARVLGELDAVQAMALLAVAMDAHPPEIVEGKAPEIELTDSRHPLLMPELAARLGITRSSEPVPVSLRVGGTSPVLVISGPNTGGKTVALKTTGLLALMAQCGLHVPAAPGSRLPVFRRVYADIGDEQSIAENLSTFSSHLAAIVEMTRDLARPALVLLDEVGAGTDPTEGGALGVAIVEHFRRAGAMVLATTHHGLMKAYAQSTPGVATASFGYDPGNYRPTYRLTLGAPGRSLALEMAERLGLPAEVVADARARRDDKERQAEALLARLERETAALAQDREQTLAAKAEAEGTLARVAALERELQAKKRREVELFAKELKRRGEDAERKAAEAIRAAVETLETAQKAAAAAPRVRREAIAAIRDARDAVLKDPELGLPDEPDAPALAIAVGMRVRVKAMGLTGEVTSVHGPEAEVAVSGKRLRVATHELVSLGNKQPQGAWGGGAPPAQRTPRAAPGVFGASGEGRPPTKTIPPEVNLIGLTVEDARERVDKLLDDAALSDRHEIRLVHGFGEGKLRKAIAQMLEKHPLVSSWRLGGPSEGGGGATVVELKD*