ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_43358_2

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(954..2156)

Top 3 Functional Annotations

Value Algorithm Source
Type 4 fimbrial assembly protein pilC Tax=sediment metagenome RepID=D9PFH5_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 403.0
  • Bit_score: 515
  • Evalue 3.60e-143
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 404.0
  • Bit_score: 453
  • Evalue 4.70e-125
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 405.0
  • Bit_score: 530
  • Evalue 1.50e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
GTGCCTGCTTACGTCTGGAAGGGCAAGACCCGCGACGGCAAGGTGGTTTCGGGCGAGAGGGTCGCCGACAACAAGGAAACCGTGATGCAGCTGCTCCGGCGCGACCAGATCCTGGTCTCGTCGGTGAAGGAGAAAGGCCGCGAGCTCGCGCTGCCGAAGTTCGGCGGGGGCGTGCCCTCGAAGGACCTCGCCATCTTCACCCGCCAGTTCTCGGTCATGATCGACGCCGGCCTGCCGCTCGTCCAGTGTCTCGAGATTCTGGGCGGCCAGCAGGAGAACAAGACCTTCGCCAAGATCCTGCAGCAGACGCGAATGGACGTCGAGGGCGGCGCCAGCCTCGCCGACGCCATGCGCAAGCACCCGAAAGGCTTCGACGAGCTCTACACCAACATGATCGCGGCGGGCGAGGCGGGCGGTATCCTCGACACGATCCTGAAGCGGCTCGCCGTCTACATCGAGAAGAACGTCAAGCTGATAGCCCAGGTCAAGGGCGCCATGGTCTACCCGATCGCGGTGCTCGGCATCGCCGGGATCGTGATCGCGGTCATCCTGTGGAAGGTGATCCCGACCTTCGCCTCGATGTTCGCGGGCTTGAACGCCGAGCTGCCGCTGCCGACGCGCTTCGTGATCCTTCTCAGCAACTGGTTCGTGCGCCTGCTGCCGTTCATCGTGATCGGCGGGATCATGGGCGTCGTCGCCTTCCGCCGCTACTACGCCACCTACGGCGGGCGCCGCGTCGTCGACAAGATCATCCTGAAAATGCCGATCTTGGGCACGCTGATGCAGAAGATCGCGGTCGCCCGCTTCTGCCGCACGCTCTCGACGCTGATCGCCTCGGGCGTGCCAATCCTCGACGGCCTCGAGATCACCGCGCGCACCGCAGGCAACGCCATCATCGAGGACGCGATCATGGCGGTGCGCAAGGGGGTCGAGGGCGGCCTCACCCTCGCACAGCCGCTCAAGGAAACCGGCGTCTTCCCGCCGATGGTGGTGCAGATGATCGGCGTCGGCGAGCAGACGGGCGCCCTCGACAACATGCTGACGAAGATCGCCGATTTCTACGAGGAAGAGGTCGATCAAGCGGTGGCCAACCTGCTGACGCTGATGGAGCCGGTCATGATCCTGTTCCTCGGGATCACCGTCGGCGGCATCATCATCGCCATGTACCTGCCGCTGTTCGACCTGATCAGCAAGCTTTCCTGA
PROTEIN sequence
Length: 401
VPAYVWKGKTRDGKVVSGERVADNKETVMQLLRRDQILVSSVKEKGRELALPKFGGGVPSKDLAIFTRQFSVMIDAGLPLVQCLEILGGQQENKTFAKILQQTRMDVEGGASLADAMRKHPKGFDELYTNMIAAGEAGGILDTILKRLAVYIEKNVKLIAQVKGAMVYPIAVLGIAGIVIAVILWKVIPTFASMFAGLNAELPLPTRFVILLSNWFVRLLPFIVIGGIMGVVAFRRYYATYGGRRVVDKIILKMPILGTLMQKIAVARFCRTLSTLIASGVPILDGLEITARTAGNAIIEDAIMAVRKGVEGGLTLAQPLKETGVFPPMVVQMIGVGEQTGALDNMLTKIADFYEEEVDQAVANLLTLMEPVMILFLGITVGGIIIAMYLPLFDLISKLS*