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PLM3-1_170_b1_sep16_scaffold_608_6

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 5609..7372

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 595.0
  • Bit_score: 689
  • Evalue 2.00e-195
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 581.0
  • Bit_score: 535
  • Evalue 1.10e-149
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 584.0
  • Bit_score: 786
  • Evalue 1.70e-224

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1764
GTGAACGTCTTTCAGCGATTGCTGCGTTACGCCGCCCCGTATCGAACGCGATTGGTGTGTGCGATCGTCGCGATGCTGGTCTATGCCGGCGCGTCCGCCTATCTCGCGTCGCTGGTGAGGCCTATCTTCGATCAGGTCCTGCCGAATCGCGAGCGGCTTCTCTACACCTCAGTGGCCATTCTGGTCGCCTATCTGCTGAAAGGCATCGGCTCGTATCTGTCCGATTACTGGATGGCGGATGTCGGACAGCACGTGGTGAAGGACGTGCGAAGCGCCCTCTTCCGGCACATTCTCGATCAGTCGGCCTCGTTCTTTTCTCGCCATACGACCGGCCAACTGCTGTCCCGCGTGACCAATGACGTGGCGCAGGTGCAGCGGGCCGTGTCGGAAACGATTGGCGATCTGCTTCGAGAGTCGCTGGCGATCGTCGGCTATACGGCATTGTTGTTCTATTACGACGCCCGGCTGGCGCTCGTGTGCTTGACCGGTGCGCCCCTCGTGATTTATCCGCTGGCGCGGCTCGGCCGTCGCGTGCGCAAGACCACGCGTCGAAGTCAGGAACAACTGGAGCACCTCTCTCATCTTGGCGCCGAAGCCTTCGCCGCTCATCGGATTGTGAAGGCGTTTGGGGCGGAAGCACGTGAAGGAGAAAAGTTCGGTCGAGAGCTGTTTCATCTCTACCGAACCAATATGAAGGTCACCTCGATCATGTCGGTGCTACCGCCGGTCATGGAGCTTCTGGGTGCGGTGGGCCTGATTGGGGCGCTGTGGTATGGCAGCCGGCAGATCGCCGCCGCTCGCCTCACGCCGGGAGAGTTCACGTCGTTTCTCGCTGCGCTCCTCCTGATGTACGGTCCAATCAAGAAGCTCAGTCGCGTCAATGCGAATCTTCAGCAGACGGTTGCGGCCTCGGAGCGTATTTTCGAAGTGCTCGACACACACAGTGAGGTGCCCGAGCCGCCGGGCGCGCCTCCGCTGCCACCCTTCGCTGAATCGATCGTCTTCCGAAATGTGACCTTCGCGTATGAGGACGTGCGGCCGAGGACGATTCTCAGGGGCATCTCGCTCGACGTGAGAACGGGCGAGATGGTGGCGATCGTGGGGCGCAGCGGAGCGGGCAAGACCACGCTGGTCAATCTCCTTCCACGGTTCTTCGATGTGACGGACGGGACGATTCTGATCGACGGGCGAGATATCCGGCAGGTCACGCTCGCCTCATTGCGGTCTCAAATCGGCATCGTCACGCAGGAAACGGTGTTGTTCGACGACACGATCGCCAACAATATCGCATACGGCGTCGTGCGAGCTTCGCGCGACGAGATCGAAGCCGCCGCGCGCACGGCGCATGCCCACGAGTTCATCGCGACGCTGCCCAACGGGTATGACACGTTCATCGGCGAGCGGGGACAGCGGCTCTCAGGCGGGCAGCGCCAGCGGCTCGCGATCGCCCGCGCGCTGCTCAAGAACGCGCCGATTCTGATTCTCGATGAGGCCACCTCATCTCTGGATGCGGAGTCTGAGCGGCTCGTGCAGGATGCACTCGCGACGCTGATGCTGAATCGAACGTCATTCGTGATTGCCCATCGCCTCTCGACGATTCGGAGAGCCGACGCCATCGTCGTGCTGGAGAAGGGCCGCGTGGTCGAGGTGGGACGCCACGATGAGCTGCTGACTCGGTCGGGGGTGTACTCGAATCTCTACGCCATGCAGCTTCTCGAGCCGCGTACGGCGGAAGACCGGGAACTGAAGAGCAGCGGGGTGTAG
PROTEIN sequence
Length: 588
VNVFQRLLRYAAPYRTRLVCAIVAMLVYAGASAYLASLVRPIFDQVLPNRERLLYTSVAILVAYLLKGIGSYLSDYWMADVGQHVVKDVRSALFRHILDQSASFFSRHTTGQLLSRVTNDVAQVQRAVSETIGDLLRESLAIVGYTALLFYYDARLALVCLTGAPLVIYPLARLGRRVRKTTRRSQEQLEHLSHLGAEAFAAHRIVKAFGAEAREGEKFGRELFHLYRTNMKVTSIMSVLPPVMELLGAVGLIGALWYGSRQIAAARLTPGEFTSFLAALLLMYGPIKKLSRVNANLQQTVAASERIFEVLDTHSEVPEPPGAPPLPPFAESIVFRNVTFAYEDVRPRTILRGISLDVRTGEMVAIVGRSGAGKTTLVNLLPRFFDVTDGTILIDGRDIRQVTLASLRSQIGIVTQETVLFDDTIANNIAYGVVRASRDEIEAAARTAHAHEFIATLPNGYDTFIGERGQRLSGGQRQRLAIARALLKNAPILILDEATSSLDAESERLVQDALATLMLNRTSFVIAHRLSTIRRADAIVVLEKGRVVEVGRHDELLTRSGVYSNLYAMQLLEPRTAEDRELKSSGV*