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PLM3-1_170_b1_sep16_scaffold_7126_5

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(4990..5532)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVZ3_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 8.50e-44
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 2.40e-44
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY14127.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 1.20e-43

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GCTTGGACCGCGGGCGATATCGCCGCCCGCGACCAGCTCATGACGGTCGTGTATCAGGAGCTGCGCCGCCGGGCGGCCGGCCAGCTGCGGCGGGAACGCCGTGGGCACACGCTGCAGCCGACGGCGCTGGTGCACGAGGCGTACATGCGGCTGGTCGATCAGCGGCGGGTCGTGTGGCAGAACCGCGGGCAGTTCTTCGGGGTGGCGTGTCAGATGATGCGGCGGATCCTGGTCGATCGCGCCCGCGCGCACCGGATGGCGAAGCGGTCGGGACAATGGGCGCGGGTCACGCTCGACGAGGGTGTGCGGGCGACGCCCCCGATCGCGGTCGACGTGCTCGATCTCGACGCGGCGCTCACGCGCCTGGCAACATTCGATCCACGCAAGAGTCAGCTGGCCGAGCTGCGCTTCTTCGGCGGGCTCTCACTCGAAGAGGCTGGCGAGGCGCTCGAAATTTCACTTGCCACTGCCGAGCGGGACTGGCAGGCGGCGCGCGCGTGGTTGTTGAAGGAGTTGCGTGGTGAGCGACCGCATGACACCTGA
PROTEIN sequence
Length: 181
AWTAGDIAARDQLMTVVYQELRRRAAGQLRRERRGHTLQPTALVHEAYMRLVDQRRVVWQNRGQFFGVACQMMRRILVDRARAHRMAKRSGQWARVTLDEGVRATPPIAVDVLDLDAALTRLATFDPRKSQLAELRFFGGLSLEEAGEALEISLATAERDWQAARAWLLKELRGERPHDT*