ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1297_7

Organism: PLM6_170_b1_sep16_Methylomirabilis_oxyfera_63_39

near complete RP 44 / 55 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3971..4345)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 124.0
  • Bit_score: 241
  • Evalue 3.10e-61
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 123.0
  • Bit_score: 195
  • Evalue 5.50e-48
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 124.0
  • Bit_score: 241
  • Evalue 4.40e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCGCGCATTGCGGGTGTAGATCTTCCCCGCGAGAAACGGCTGGAGGTGGCCCTCACGTATATCTATGGGATCGGGCGTTCGGCCTCGCAGAAGATCCTCAGTGAGGCCAACGTCAGCCCGGATGTCCGGGTAAAGAACCTGACCGAGGACGAGGTCAACCGACTCCGCCGGGTGATCGAGGGGCAGTTCCGGGTCGAAGGGGACCTGCGCCGGGATGGGAGTATGAACATCAAGCGCCTGATCGACATCGGCTGCTACCGGGGCATGAGGCATCGGCGGGGGCTCCCGGTGCGCGGCCAGCGCACCCACACCAATGCAAGGACCCGCAAGGGGCCGCGCCGGAGGACGGTGGGGGCCCGGCGGAAGACGTAA
PROTEIN sequence
Length: 125
MARIAGVDLPREKRLEVALTYIYGIGRSASQKILSEANVSPDVRVKNLTEDEVNRLRRVIEGQFRVEGDLRRDGSMNIKRLIDIGCYRGMRHRRGLPVRGQRTHTNARTRKGPRRRTVGARRKT*