ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3183_20

Organism: PLM6_170_b1_sep16_Methylomirabilis_oxyfera_63_39

near complete RP 44 / 55 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(11521..12255)

Top 3 Functional Annotations

Value Algorithm Source
response regulator receiver sensor signal transduction histidine kinase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 246.0
  • Bit_score: 238
  • Evalue 4.00e-60
rpaA; osmotic stress-responsive two component signal transduction system response regulator of energy transfer from phycobilisomes to photosystems RpaA similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 190.0
  • Bit_score: 100
  • Evalue 4.80e-19
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 246.0
  • Bit_score: 238
  • Evalue 5.60e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 735
ATGCATGAAGGCCCTATTGTCATCATTGATGATGATCCTCTATTCTGTGATTCCGTCGGTATAGTCCTCGGAAAGGCGGGTTACCAGGTCCTGTCAGCTCACGACGGTCCCTCGGGGATCGAGCTGGTCCGGGCCGCCCGCCCGGCTATTATCATCCTAGACATGCTAATGCCAGGAATAGATGGCATCACAACCTGTCAGCGCCTGAAACAGGATCCGGTGACCAGGGAAATTTCCGTCGTCGGAATCACGGCCTCGCTGGAGTTGCGGTACGCCGAGGAGGCCTATCGTGCGGGCGCGGAGTTCTTCCTGACGAAACCCCTTGCGCCAGAAAATCTGCTTTATCTGGTGAGAATGGTTCTGGAAAGGGAACACCCCAGCACCCTGATGCGCCCACGCCTCTCTGCCCGGTTTCGGGCGCACCTGCCGGTCCGGTGCGTCCTTCGTGGAGATGGGGGAACGACCCGGGAAGTTGAAGGGTACACGGCGGATATAGGCTCAGCGGGCCTCCTGATCTGGCTGCCCGAAATGATAGTTCCGGGAACCATGTTTCATCTTCGGCTAACGTTCCCCACGGGGGAGGTGACCGCCGAAGTGCAAGTAATCTGGAAGGACTATCAGGCAGGCTCCCAAGCCATTCCCCACGGCGTCAGGCTGGTTCGCTTTGCCCCAGAGATCGACTGGCTGAAGTACAAGCGATTTCTCCATGAGTTAGCGGCGAAAGAAGGAGCGTAA
PROTEIN sequence
Length: 245
MHEGPIVIIDDDPLFCDSVGIVLGKAGYQVLSAHDGPSGIELVRAARPAIIILDMLMPGIDGITTCQRLKQDPVTREISVVGITASLELRYAEEAYRAGAEFFLTKPLAPENLLYLVRMVLEREHPSTLMRPRLSARFRAHLPVRCVLRGDGGTTREVEGYTADIGSAGLLIWLPEMIVPGTMFHLRLTFPTGEVTAEVQVIWKDYQAGSQAIPHGVRLVRFAPEIDWLKYKRFLHELAAKEGA*