ggKbase home page

PLM3-1_170_b1_sep16_scaffold_7358_5

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(5165..5617)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein implicated in colicin V production bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 169.0
  • Bit_score: 107
  • Evalue 1.10e-20
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 104.0
  • Bit_score: 110
  • Evalue 1.10e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGCCACTGGTGAATATCACTGATCCGATCCTGCTTCTCCTTCTTTTCCTCTTTGGCTTGAGAGGTTATTTTAAGGGGTTGTTTCGGGAAAGCTTCTCTTTGCTGGGACTTTCTATCGGTCTCATGGTAGCCATCCGTTACGACGATCCCCTGGCAGCCCTGTGGGGTTGGCTCCTTCACCATTACGCGAAACACCTCCTTCTCCAGGGCGTCGATCGGGCCGGCGGGGCTGTGCTGGCTCTTAGCAAGGGAACCGTAGTTTTGGCATTGATCATTTTCTTCGTCGTCTCCTCTCCTTTTTTGCCGCCACAGACGAAGCGAAAAATCGACGAGTCCTACCTTGTTCCTCCCCTCTCTCAGTTGGGCGGCGGACTCTATCGGCTCGGCAAGGCGAAACTGCTCCCGCTCGAGAAAGCGCAGGCGCAAGTGAGAGAACGGGCCGCCTTTCTCTAG
PROTEIN sequence
Length: 151
MPLVNITDPILLLLLFLFGLRGYFKGLFRESFSLLGLSIGLMVAIRYDDPLAALWGWLLHHYAKHLLLQGVDRAGGAVLALSKGTVVLALIIFFVVSSPFLPPQTKRKIDESYLVPPLSQLGGGLYRLGKAKLLPLEKAQAQVRERAAFL*