ggKbase home page

PLM3-1_170_b1_sep16_scaffold_41739_1

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 1..333

Top 3 Functional Annotations

Value Algorithm Source
TctA subunit of the tripartite tricarboxylate transport(TTT) family bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 107.0
  • Bit_score: 169
  • Evalue 1.30e-39
tctA4; tripartite tricarboxylate transporter TctB similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 110.0
  • Bit_score: 164
  • Evalue 1.60e-38
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 181
  • Evalue 6.20e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
CTCTACCCGGCGATCCTAGTGTTTTGTGGCATCGGCGTGTTCAGTTTGAACAACAGCGAGTTCGATATCTATCTCATGGGGCTGTTCGGGTTGCTGGGGTACGTCTTCTCAAAGCTCGGCTGCGAACCGGCGCCGATGTTGCTTGCCTTCATCCTGGGTCCGTTGATGGAAGAGTACTTGCGGCGAGCGATGCTGATCTCTCGCGGCGATCCGATGGTCTTCCTGCGGCGTCCGATCAGCGCGACCTTGCTCGGTCTTGCCGTGCTCGCGATGTCCACGGTGCTCATTCCGGCCTTTTACAAAACCCGCGAAGAAGCCCTTTCGCGAGAATGA
PROTEIN sequence
Length: 111
LYPAILVFCGIGVFSLNNSEFDIYLMGLFGLLGYVFSKLGCEPAPMLLAFILGPLMEEYLRRAMLISRGDPMVFLRRPISATLLGLAVLAMSTVLIPAFYKTREEALSRE*