ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3970_8

Organism: PLM6_170_b1_sep16_Thaumarchaeota_37_7

near complete RP 29 / 55 MC: 3 BSCG 14 / 51 ASCG 31 / 38 MC: 1
Location: comp(5244..6011)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator TrmB bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 255.0
  • Bit_score: 433
  • Evalue 8.80e-119
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 255.0
  • Bit_score: 429
  • Evalue 3.60e-118
Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 255.0
  • Bit_score: 433
  • Evalue 1.20e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 768
ATGAGTATTTCTGACAAGACACGAAAAGCCCTAGAGCAAATAGGGCTTACTAGTTATGAAATCAGAACTTTTACTTCATTATTAAAATCAGGTGAGCTTACGGCATCTGATCTAAGTCAGAAATCAGGCGTACCATACTCGAAAATTTATGAGGTTTTAGGTGCCTTGGAAGAAAAAGGATGGATAGGTTCTGATGACTCAAGACCTACCAAATACTTGGCCAAATCGCCTACAACTGGTCTTGAAGTTACTAAGCAAAAAGCAGATACAGAGTTTAAGGAGAATCAGAATGTTATTTTAAACGAACTTGTTCCGCTATATGAAAAAAGTGGTTCTAGTGAACGTCCTGACATTTGGGTTTTATCAGGTGCCGTTAACATTGTTGCAAAGATTCTAGAAATAATAGAATCTTGTAGAAATGAGGTCCTTATCGCAGTTCCAAAGGCTAGTGAAGAGTTAGTTAAGCAGGCATTACCAAAGCTTCGTTCCCTTCATGACAGAGGAGTTGATGTTACAATATTAACATCAGATAAGATAGACAAGGATTCTTTAACTGCAATTTCAAGGGTGGCAAAGGTCAAGCTCAAAAAAGGGTTATTTGGTGGCGGGATAATTTCTGATAAACGTTATGTAGTGATATTACTTGGACCAGAAATTGGCGATTCGTCTTCTTTGGATATGGTTGCAATTTGGGCTGATCATGCAGGTCTTGCAGGATTTGCAAGAGAGTACTTTGAATACTTATTAAAAGATTCAGAGGAGGTATAA
PROTEIN sequence
Length: 256
MSISDKTRKALEQIGLTSYEIRTFTSLLKSGELTASDLSQKSGVPYSKIYEVLGALEEKGWIGSDDSRPTKYLAKSPTTGLEVTKQKADTEFKENQNVILNELVPLYEKSGSSERPDIWVLSGAVNIVAKILEIIESCRNEVLIAVPKASEELVKQALPKLRSLHDRGVDVTILTSDKIDKDSLTAISRVAKVKLKKGLFGGGIISDKRYVVILLGPEIGDSSSLDMVAIWADHAGLAGFAREYFEYLLKDSEEV*