ggKbase home page

PLM3-1_170_b1_sep16_scaffold_8840_3

Organism: PLM6_170_b1_sep16_Thaumarchaeota_37_7

near complete RP 29 / 55 MC: 3 BSCG 14 / 51 ASCG 31 / 38 MC: 1
Location: comp(1899..2411)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KL09_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 160.0
  • Bit_score: 265
  • Evalue 3.60e-68
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 160.0
  • Bit_score: 265
  • Evalue 5.00e-68
rps4p; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 160.0
  • Bit_score: 258
  • Evalue 1.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrosoarchaeum limnia → Candidatus Nitrosoarchaeum → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 513
ATGGGAGATCCAAAGTATCCAAGAAAAAAATGGAGAAAGCCAAAACGTCCACTTAATTATGATCTAAAGATGGAAGAGCTAAAGACACTTGGTACCTTTGGTCTTCGAACAAAGCGAGAGTTATGGAAGGCCCATACAGAACTATCAAGGGTAAGAAACCAAGCTCGCTCCTTGCTTGCCCTAAGACAAGAAATTAGAGAAAAAGAAGAGCCAATTCTGTTAAAAGCTCTGTCAAGGGTGGGATTGGTAAAAAGAGAGTCGACACTTGATGATGTCTTAAACCTGCAGGTTACTGATTTGTTGTCACGAAGATTGCAAACAATCGTCAGAAAGAAATTAAATTTTAAAACTCCATTCCAAGCTCGGCAGGCAGTTGTTCATGGACACATAATGATTGGCGATAGAGTTGTTGACGTGCCTTCATACATAGTAAAAATCGAGGAAGAATCAAAAATTCGTCTTGTGCCGGATTCATCGTTTGTGTTTAATAATAGGCTACTATGGCAATGGTAA
PROTEIN sequence
Length: 171
MGDPKYPRKKWRKPKRPLNYDLKMEELKTLGTFGLRTKRELWKAHTELSRVRNQARSLLALRQEIREKEEPILLKALSRVGLVKRESTLDDVLNLQVTDLLSRRLQTIVRKKLNFKTPFQARQAVVHGHIMIGDRVVDVPSYIVKIEEESKIRLVPDSSFVFNNRLLWQW*