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PLM3-1_170_b1_sep16_scaffold_12011_8

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(5215..5391)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Patulibacter medicamentivorans RepID=H0E3H0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 51.0
  • Bit_score: 86
  • Evalue 7.80e-15
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 51.0
  • Bit_score: 86
  • Evalue 1.10e-14
RNA polymerase sigma 28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 48.0
  • Bit_score: 84
  • Evalue 6.40e-15

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 177
CTGCCCGAGCGCGAGAAGCTCGTCGTCACGCTCTACTACTACGAGGAGCTGACGCTCCGCGAGATCGGGGAAGTGCTCGGCGTGACCGAGTCGCGCGTCTCCCAGCTCCACACGAAGGCGATCCTTCGCCTGAAGGCCCACCTCGCGGGCGCCGCGCGCGCTCCCGCCGAGAAGTAG
PROTEIN sequence
Length: 59
LPEREKLVVTLYYYEELTLREIGEVLGVTESRVSQLHTKAILRLKAHLAGAARAPAEK*