ggKbase home page

PLM3-1_170_b1_sep16_scaffold_14989_4

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(2565..3536)

Top 3 Functional Annotations

Value Algorithm Source
ligC; DNA ligase, putative (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 322.0
  • Bit_score: 274
  • Evalue 3.20e-71
DNA ligase, putative Tax=Rhizobium fredii (strain HH103) RepID=G9AHI1_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 322.0
  • Bit_score: 274
  • Evalue 1.10e-70
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 320.0
  • Bit_score: 382
  • Evalue 3.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 972
ATGGAGGCGGAGCTCGTGCGCGAGCTCCCGGAGGGCGACGCCTGGCAGTACGAGCCGAAGTGGGACGGCTTTCGAGGAGTTCTCGAGAACGGCTCGGGCGAGCTCCGGCTCTGGTCGCGCAACGCCCGGCCGCTGCTCCGCTACTTCCCCGAGCTCGGGCCGCTCGCGAAGCTCCTCCCGCCGAACTCGGCCCTCGACGGGGAGATCGTGATCGAGCGCGGCGGCGTGCTCGACTTCGACGCGATGCAGACCCGCCTCCACCCAGCGGAAAGCCGGATCCGGAAGCTGTCCGCGGAGATCCCGGCGCGGTTCGTCGCCTTCGACGTCCTGGTCTGGAAAGGCGAAGAGGTGTGGCATGAACCGCTCTTCAAACGGCGCACGAAGCTCGAACGGAGCGCACGGCGCTTCGGGCTCTCGCCCGCCACCGGCGACCGAGCGGAAGCCCTCGGCTGGCTCGAGCGCTTCGAGGCGATCGGGTTGGACGGGGTTGTCGCCAAGCGTCGCGACCTCCCGTACCTTCCGGGCTCGCGCGACGGCGTCGTCAAGGTGAAGCCCGAGAAGACGGCCGACTGCGTCGTCGTCGGGCTTCGCTGGAAGTCGCGTCCGGACCGGATCGCGACCCTTCTCCTGGGCCTCTACCGCGACGACGGGGAGATCGACTACGTCGGCTCGTCCGCGGTCGCCCCCGCCCGCCACGCGGAGATCGCGAAGCGGGTGCTCCCGCTCCTCGAGGACGCTCCCGACCGCCGCTTCTCGGAGCCGAACCGCTGGGGAGGCGGCGAGCTCGAGGAGTCTCCCGTCCGGCCGGAGCTCGTCGTCGAGGTGCGCTACGACAAGGTGCAGTCGAACCGCTTCCGCCACGGGACGAAACTCATCCGCTTCCGGGATGACAAGGACCCGAACCGGTGCACCTGGCGAGACCTACGCCCGCCGCGTGCGCGAGGCCTCACAGTCGCCTCGTTGCTCGGCTAG
PROTEIN sequence
Length: 324
MEAELVRELPEGDAWQYEPKWDGFRGVLENGSGELRLWSRNARPLLRYFPELGPLAKLLPPNSALDGEIVIERGGVLDFDAMQTRLHPAESRIRKLSAEIPARFVAFDVLVWKGEEVWHEPLFKRRTKLERSARRFGLSPATGDRAEALGWLERFEAIGLDGVVAKRRDLPYLPGSRDGVVKVKPEKTADCVVVGLRWKSRPDRIATLLLGLYRDDGEIDYVGSSAVAPARHAEIAKRVLPLLEDAPDRRFSEPNRWGGGELEESPVRPELVVEVRYDKVQSNRFRHGTKLIRFRDDKDPNRCTWRDLRPPRARGLTVASLLG*