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PLM3-1_170_b1_sep16_scaffold_29991_2

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(360..1016)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9K0_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 178.0
  • Bit_score: 171
  • Evalue 9.10e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 178.0
  • Bit_score: 171
  • Evalue 2.60e-40
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 218.0
  • Bit_score: 365
  • Evalue 2.70e-98

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGAGGTATCCGCGTCCACCGTGCTAGCGTTCGCCGGCTCGCAGCCGGCCTTCGCCATGCGCAAGCAACACGCTCACCTCTCCGACGAGGCCCTGGTCGCGCTCGTCGCCCGGGGGGACGAGAGTGCCCTCGCGGAGCTCTACGACCGGGTGAGTCGCATCGCGTACGGCCTTGCCCTCCGCGTCCTTCGCGACGAGCGGCTCGCCGAGGACGCCGTGCAAGAAGGGTTCCTCGCCGTTTGGCGCACCGCCGCCGCGTTCCGCGCCGAGCGCGCGAAAGCGAGCACGTGGATCCTCACGCTGGTACACCGGCGAGCCGTCGACCTCGTCCGCCGGGAGGAGCGACGCCGAGCCGAGCCGCTCGACGACGAAGTCGTCGCAAGCGCCGGGGAGGCATCGGAGCCCACCGAGGAGGCCGCCTGGCTGCGCTTCGAGCGGGACCGCGTCCAGGCGGCGCTCAAGCAGCTCCCCGATGTCCAACGAGAGGCGCTCGAGCTCGCCTACTACGGAGGCTTCTCGCAATCCGAGCTCGCGCAGAGGCTCGGCGTGCCCCTCGGAACCATCAAGAGCCGGATGTTCGCCGGGCTCGCGCGCCTTCGCGAGCTCTTGGACGACAGCGCGCAGGAAGGATCATGGAAACCGGAATTCACGAGCTGA
PROTEIN sequence
Length: 219
MEVSASTVLAFAGSQPAFAMRKQHAHLSDEALVALVARGDESALAELYDRVSRIAYGLALRVLRDERLAEDAVQEGFLAVWRTAAAFRAERAKASTWILTLVHRRAVDLVRREERRRAEPLDDEVVASAGEASEPTEEAAWLRFERDRVQAALKQLPDVQREALELAYYGGFSQSELAQRLGVPLGTIKSRMFAGLARLRELLDDSAQEGSWKPEFTS*