ggKbase home page

PLM3-1_170_b1_sep16_scaffold_43655_3

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(1433..1768)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine ABC transporter permease Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FW93_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 94
  • Evalue 5.50e-17
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:EOD63627.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 94
  • Evalue 7.70e-17
spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 91
  • Evalue 1.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 336
TTGAGCGCAGTCACGCACGGTGAGACGCCGCCCCCGGATGGCCTGGGGCGGCGTCTCTCGGCGTTTCTCTTCCGCCACCCGCATCTGCGCCTAGGAGGCCTGCTCGCGGCGCCTGCCGGGTGGCTCGTCGTTGCGTATCTCGGCTCGCTTGCCTTGCTATTCGTCGCGGCCTTCTGGCGGCTCGACCCGCTCGCCACCAGGATCGTGCACGACTACAGCCTCGACAACTTCCGGACGCTGGTCGAGGAGGACGTCTACCGCAAGATCGCGTTCCGCACAGCTGGGACGCCTTCCCAATTGCCTACTACATGGCGCGAATTGCCTCGCCCCGAATGA
PROTEIN sequence
Length: 112
LSAVTHGETPPPDGLGRRLSAFLFRHPHLRLGGLLAAPAGWLVVAYLGSLALLFVAAFWRLDPLATRIVHDYSLDNFRTLVEEDVYRKIAFRTAGTPSQLPTTWRELPRPE*