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PLM3-1_170_b1_sep16_scaffold_2053_29

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(23799..24293)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2W8_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 158.0
  • Bit_score: 138
  • Evalue 3.70e-30
sigma70-ECF: RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 158.0
  • Bit_score: 140
  • Evalue 3.60e-31
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 145
  • Evalue 5.60e-32

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 495
ATGGAGGCTATTTACGATCAGCTCAACCGCCAGGCTTTCGGCCTGGCGTACCGGATCCTCGGCGACGGCCCGTCTGCTGAAGATGTGGTCCAAGAGGCGTTCCTGACGCTCTGGCGACAGGCCGAGCGGGTGGACTCCGCCCGCGGCAAGCTATCCTCGTTCGTGCTGACTATCGTCCATCACAAGGCGATCGACGCCCTGCGGGCGAAACGGGGCCTGACGGCCCGGCAGTTGCCCATCGAAGTCGGCGATATCGAGAAGCCCGGGTCAGACGTGGCCGAGCGCGTTCTGAGCTCGCTCAGCCGGGACGAGGTCCGGAACGCCCTCGCCACCGTGCCGGACGATCAGCGACGGGCGATTGAAATGGCGTATTACGAAGGACTGACGCATGTCGAGATCGCGGAGGCGTTGAGCCTGCCGCTCGGAACCGTGAAGAGCAGGCTGCGGCTTGGCCTGGACAAGATGAGGACGGCGCTAGGAAGCTGGACAAGCTGA
PROTEIN sequence
Length: 165
MEAIYDQLNRQAFGLAYRILGDGPSAEDVVQEAFLTLWRQAERVDSARGKLSSFVLTIVHHKAIDALRAKRGLTARQLPIEVGDIEKPGSDVAERVLSSLSRDEVRNALATVPDDQRRAIEMAYYEGLTHVEIAEALSLPLGTVKSRLRLGLDKMRTALGSWTS*