ggKbase home page

PLM3-1_170_b1_sep16_scaffold_6866_8

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 4533..5090

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B029_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 151.0
  • Bit_score: 77
  • Evalue 1.20e-11
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 151.0
  • Bit_score: 77
  • Evalue 3.30e-12
Tax=RBG_16_Chloroflexi_64_32_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 189.0
  • Bit_score: 187
  • Evalue 1.10e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_64_32_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 558
ATGGAATGCTACGCCTGCGACCAGGAGGCGATCGGACGCTGTTCCCGCTGTGGCAACCTATATTGCGCTGCCCACGGCGACGCTTCGCCCGCCGCGGGCGCTCAGCCCTTCTGCGCAGAGTGCCTCGACCCTGTTAACGCCACCCCCTCCGGCGTAGCCTTCCTCGCCTCCCTCTTCGGCCTACTCATCGCCAGCGTCCTCGCCCTCTGGCTGCTGATCCGCCCCCCTTCGCTGCCAAGCGAGTCGTCCGGCGCCGTACGGCCGCTGCCCGTCGTGTCCCAGGCCGCCGAACCGACCGCGGCGCCGTCCGCGGAGACCGCTGCTCCTACGCCAGAAGCGACCGGAGCGCCAGCGACTGCTCTACCCGAAGCGACTCCTGCGCCCACGGAGGAGCCGCCGGCAGGGCCAATCCAGTACACGATCCAGGACGGCGACACCATATCTGGGATCGCGACAGACCACGGCATAAGCTACCTGACTCTCCTCGAGTTCAACGGGCTCACGGAAGAAGAGGCGTCGGTGCTCCAGCCCGGGGACGTCATCTCGATACCGCAATAG
PROTEIN sequence
Length: 186
MECYACDQEAIGRCSRCGNLYCAAHGDASPAAGAQPFCAECLDPVNATPSGVAFLASLFGLLIASVLALWLLIRPPSLPSESSGAVRPLPVVSQAAEPTAAPSAETAAPTPEATGAPATALPEATPAPTEEPPAGPIQYTIQDGDTISGIATDHGISYLTLLEFNGLTEEEASVLQPGDVISIPQ*