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PLM3-1_170_b1_sep16_scaffold_7395_12

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(9163..10512)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7S5_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 198.0
  • Bit_score: 123
  • Evalue 3.40e-25
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 198.0
  • Bit_score: 123
  • Evalue 9.70e-26
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ37908.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 198.0
  • Bit_score: 123
  • Evalue 4.80e-25

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Taxonomy

Sphaerobacter thermophilus → Sphaerobacter → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1350
TTGAGCGTCAACGCACCCGCCCGAGCGGACGCGGCCGCCGTCATCGACCGCCTACGCCCCTCGATCACGGCCGCACAACGCGGCGATCAAGCGGCGTTCAGACTGCTATATCAAGAGTATGCCCGCTCTGTCTACAACCTCGTCTTCCGCTGCGTACGGAACCCTCAGGCCTCTGAGGACGTGTGCCAGGAGATCTGGGTGAAGGCCTTTCGCGAACTGCCGAAGCTCCAGGACCCGCAGGCATTTCCCGCGTGGCTCTACCGCATAGCAGCCCGCGCCTGCGTCGACGCCGCCCGCCAGAACCGCCGCCTTCCGGCCACCGCCGAGCTGCCCGACGACCGTTTGTCCAACGGCGACGACGACCCCGAACGCTCGACCTTGCGCCGGGAAAGAGTCCGTCTCACCTGGGAGGCCATGGCGACGATGCCCGCCCGCCAGCACGTCGCCCTCTACCTCCGGGAGATCGAAAAGCTGTCTTACAAGGAGATCGCACAGATGGTTAAGAGTTCAGAGCCGGCCGTGGAGATGCTGCTCTTCCGAGCGCGTCGCGGCTTCGCCAAAGCCTTCGAGCGGCTCGAAGCAGACGGCCCGGACCGCTGCTTCCACGCCCGCCGCTCTATGGCAGCGATTCTCGACGGTGAAGCCACTCCCGTTCAGCGCAACGCCATACGCGTGCACGTGGACGCCTGCAGCCCGTGCAACGGCGAGCTGACCCAGATGCGCAGGACGGCCGCCGCCTACTCTGCACTGCTGCCGCTGCCGGTTCCGGCGCTCCTCGGCGAACGCATCTTCGACTCTATCGGCGCCGCGGGCGCGAGCGCAGGCGCGGCGCCGGCCTCGGTCGCTAAACTGTTCGGCTTGGCCGTTGTTAAGGCGAAGGTCGCGGCCCTCACAATCGTCGCGACCGCCGCCACGACAGCGGCCAGCGTCGCGGCGATGAACTCCCCTATCGCGGACGAAATACGACCAGGCCCCTCATCCAGCCACTCCGAGATGCAGGCCGAAAACCAGCCCGGCGGGTCCGCTCCTTCACTGTCCGACTCCAGCGGGGCCCACGCAGAGGCCGCGCAGAATCCGGTCGGACAGAACCCAGACGCGCCGCTCCCACTCGACCCGAACCTCATCCCGGGCGCCACGGGAACTGTGGATGATCTAACCGCGCCCATCGCTTCCATCATCGGCGAGACAGCCAACGACCTCAATCAGTCCGTCGACGTCATCGTCAGTGAGCTAGACGCGGTCACGGGCGAGGTCCCCGCCGTACTTCCGGTTCCAGTCGACACGCCGGCAATTCCCACTTTGCCGCCGCTCCCTACCCCAACGTTCCCTCCCCTCCCGCCCCTTCCCTAG
PROTEIN sequence
Length: 450
LSVNAPARADAAAVIDRLRPSITAAQRGDQAAFRLLYQEYARSVYNLVFRCVRNPQASEDVCQEIWVKAFRELPKLQDPQAFPAWLYRIAARACVDAARQNRRLPATAELPDDRLSNGDDDPERSTLRRERVRLTWEAMATMPARQHVALYLREIEKLSYKEIAQMVKSSEPAVEMLLFRARRGFAKAFERLEADGPDRCFHARRSMAAILDGEATPVQRNAIRVHVDACSPCNGELTQMRRTAAAYSALLPLPVPALLGERIFDSIGAAGASAGAAPASVAKLFGLAVVKAKVAALTIVATAATTAASVAAMNSPIADEIRPGPSSSHSEMQAENQPGGSAPSLSDSSGAHAEAAQNPVGQNPDAPLPLDPNLIPGATGTVDDLTAPIASIIGETANDLNQSVDVIVSELDAVTGEVPAVLPVPVDTPAIPTLPPLPTPTFPPLPPLP*