ggKbase home page

PLM3-1_170_b1_sep16_scaffold_14064_1

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 3..356

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H1_S02040 {ECO:0000313|EMBL:GAF91048.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 117.0
  • Bit_score: 150
  • Evalue 9.50e-34
ABC transporter; K09695 lipooligosaccharide transport system ATP-binding protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 4.30e-20
ABC-type multidrug transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 119.0
  • Bit_score: 95
  • Evalue 5.60e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 354
ACCACGCACTACATGGACGAAGCCGCCCGCCTCTGCGATCGCATCGTGATCCTATATAAGGGGAAGATCATCGCGGAAGGCACGCCCGATGAGCTGATCGCCAGTCATGCCGGCAAAGAAGTGATCGAAGTGCACGGGCCGATTGAAGACCGGGTGGCGGTAATGGCCCGCCTGAACGGGGCCGCGGACGTGTCGGTCGAGGAGGTCGAGGACATCCTCTACGTGTACGTGCGGGGCGACGACGGGTTTGACGCATCGTCGCTAAAGCTTGATGCCGACCGGGTCGTCTTCCGCCGCGCGAACCTGGAGGACGTGTTCCTCCGGTTGACGGGCAGAGGGCTGGCGGAGGAGTGA
PROTEIN sequence
Length: 118
TTHYMDEAARLCDRIVILYKGKIIAEGTPDELIASHAGKEVIEVHGPIEDRVAVMARLNGAADVSVEEVEDILYVYVRGDDGFDASSLKLDADRVVFRRANLEDVFLRLTGRGLAEE*