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PLM3-1_170_b1_sep16_scaffold_16570_5

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 3989..4498

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Chloroflexi_73_18 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 170.0
  • Bit_score: 194
  • Evalue 6.00e-47
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 169.0
  • Bit_score: 105
  • Evalue 1.30e-20
Tax=RBG_16_RIF_CHLX_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 170.0
  • Bit_score: 265
  • Evalue 3.00e-68

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Taxonomy

RBG_16_RIF_CHLX_69_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 510
ATGGATACCGATCTCGTGGTACGGGCGCAGGGTGGAGACCAGGAGGCATTCGCCGATCTGGCCGCCACGATTGCGGATCGGTTCCTGGCGACGTCGCACCGGATCCTGAGCGACATCGACCTGGCCGAGGATGCAACGCAGCAGGCGCTGCTGAGCATCTGGCAGGACCTTCCCCAGCTCCGCGACCCGGCCCGCTTTGAGGCCTGGTCGTATCGGCTTCTCGTGCGCGCCTGCTACGCCGAGGGCCGTCGAACCCGCCGCTGGGCGCCGAACATCCGCCTCCTTCAGGTTGACGAACCGATGGCGGCGGACGGCTTCAGCTCGGTCGTCGATCGCGACCAGCTCGAGCGCGCCTTCCGACGACTATCCCTGAACCATCGAACGGTGGTGGTCCTGCACCACTACCTGGACCTGCCGCTCGACCGGGTCGCCGACGTTCTCGGCGTCCCGGTCGGGACGGTCTCTTCTCGATTGCATTACGCGATGCGTGCGATGCGCACGGCGCTCGAC
PROTEIN sequence
Length: 170
MDTDLVVRAQGGDQEAFADLAATIADRFLATSHRILSDIDLAEDATQQALLSIWQDLPQLRDPARFEAWSYRLLVRACYAEGRRTRRWAPNIRLLQVDEPMAADGFSSVVDRDQLERAFRRLSLNHRTVVVLHHYLDLPLDRVADVLGVPVGTVSSRLHYAMRAMRTALD