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PLM1_60_b1_redo_sep16_scaffold_1196_19

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: comp(17181..18653)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 490.0
  • Bit_score: 897
  • Evalue 7.50e-258
tRNA-splicing ligase RtcB Tax=uncultured crenarchaeote 29d5 RepID=D4N704_9CREN similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 490.0
  • Bit_score: 897
  • Evalue 5.40e-258
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 491.0
  • Bit_score: 738
  • Evalue 6.90e-211

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Taxonomy

uncultured crenarchaeote 29d5 → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 1473
ATGAAAAACTTGATTACGCGAACAGGAAACCATGAAATAGCAAAAGAAGGAGAATTCAAGTATGTTATTAAGAAAAATGAATCTAAAGGAATGATGGTCCCAGTTACGATATATGCAGATGAGAATTTGGTTTCAAAAATGGCGTTAGATAGAACTATTGATCAGGCTGCAAACGTTGCCACATTAAGAGGTGTTATGAAACATGTGGTGGTATTGCCTGACGGACATGAAGGATATGGTTTCCCAGTCGGTGGAGTAGCAGGAATGGATTTGGAAGAAGGTGTAATTAGTCCTGGAGGAGTAGGATATGACATTAATTGTGGTGTTAGATTAATACGGACCAATTTAAGAGGAGAAGAAATTAGACCAAAGCTAAGAGATCTTGTAAACGAATTGTTCCATAAAATTCCATCTGGAGTAGGCAGTTCAAGTCCTAGGAAGGTGACGGGATCAGAAATGGATGAACTACTTGTTCAAGGCGTAAAGTGGACAGTTCGTAATGGGTATGGCTTGGACTCTGATATTGATGTATGTGAAGAAAATGGTTGTATGAAAGGTGCGGATCCTGTTCATGTGTCCGAACTTGCTAGGAAAAGAGGGCGCTTTCAGTTGGGGACGCTTGGTTCAGGAAATCATTTTCTTGAAGTACAAAAAGTAGACAAGATTTTCGATGAAGCAGCGGCAAGAGCTATGGAAATTGAAGAGGATCAAGTTACGGTTCTGATACATTGTGGATCCAGAGGATTTGGGCACCAGGTTTGCAGCGACTATTTGAAAATTTCTGAAAAAAAAATAAGGGAATCTGGAATGAAAATTGTAGATAGAGAGCTAGCATGTGTTCCAAATAACTCTGACGAAGGCGAGAGCTATAGGAAAGCAATGTATTCTGCATTAAATTTTGCATGGTCCAACAGACAAATGATAACGCATTGGACTAGAAACACGTTTGAAAAGGTAATGGGAATGACTGAAGATGAACTGGATATGAAGTTAGTATATGATGTTTCACATAACATAGCAAAAGTGGAAAGGCATGCTGTTGACGGTGAAGGTACCAGAGACCTTGTAATACATAGAAAGGGGGCTACAAGAGCATTTCCAGCAGGGGATAGTCATATTCCAGACAAATATCGCAAGATTGGTCAACCAGTTTTTATTCCAGGTTCAATGGGAACGGCAAGCTGGATACTTCTTGGAAATACAAAATCATTAGAATTAAGTTTTGGCTCAACGGCGCATGGTGCGGGAAGAACAATGTCGAGATCAGCCGCAAGGAGAAACTATACAACAGATAGTGTAAGAAAAAACTTAGAGTTAAAAGGAGTTTACATAAAAGCTCTGAGTAGGGAAGGAATGGTTGAAGAAACCCCTGAAGCGTACAAGGATGTAGATTCTGTTGTCGAAGTATCGCATTCTCTAGGCATCGCAACGAAGGTTGCACGATTGGTTCCAATTGGGGTGATCAAAGGATGA
PROTEIN sequence
Length: 491
MKNLITRTGNHEIAKEGEFKYVIKKNESKGMMVPVTIYADENLVSKMALDRTIDQAANVATLRGVMKHVVVLPDGHEGYGFPVGGVAGMDLEEGVISPGGVGYDINCGVRLIRTNLRGEEIRPKLRDLVNELFHKIPSGVGSSSPRKVTGSEMDELLVQGVKWTVRNGYGLDSDIDVCEENGCMKGADPVHVSELARKRGRFQLGTLGSGNHFLEVQKVDKIFDEAAARAMEIEEDQVTVLIHCGSRGFGHQVCSDYLKISEKKIRESGMKIVDRELACVPNNSDEGESYRKAMYSALNFAWSNRQMITHWTRNTFEKVMGMTEDELDMKLVYDVSHNIAKVERHAVDGEGTRDLVIHRKGATRAFPAGDSHIPDKYRKIGQPVFIPGSMGTASWILLGNTKSLELSFGSTAHGAGRTMSRSAARRNYTTDSVRKNLELKGVYIKALSREGMVEETPEAYKDVDSVVEVSHSLGIATKVARLVPIGVIKG*