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PLM1_60_b1_redo_sep16_scaffold_226_9

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 11245..11667

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 139.0
  • Bit_score: 221
  • Evalue 4.00e-55
Ribonuclease VapC Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXV6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 140.0
  • Bit_score: 221
  • Evalue 4.90e-55
Conserved protein of unknown function with PIN domain, possible toxin VapC18 similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 137.0
  • Bit_score: 103
  • Evalue 4.20e-20

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GTGGTGACCGGCGCGATCTACCTGGCTGACACCAGCGTCTACACCGTTCAGGCCAAGCATCCCCAGGTACAGCGCCGGTTCGAGCAACTGCTCGCCGAAGGACGGCTTGCCACGTGCCAGATGACGACCCTGGAGTACCTCAACACGGCACCGCATCCCCGCGGATACGAGATCGTGTGGAGCGCGCTGCACGGGCAGCGCTGGCTGGACGTGACGACCGAGGCGATGAACCGCGCGCTCGCCACCCACCGGGCGCTCGCCGCGACGAGCCAGCACCGCCATTTCCGGCTGCCGGATCTCATCATCGCCGCGACCGCCGAGCTGAACGGGGCCACGGTCCTGCATTACGACACCGACTACGACCGGATCGCCGCTGTCACCGGCCAACCAGTCGAATGGGTGGCGCCAAGGGGTTCACTCTAG
PROTEIN sequence
Length: 141
VVTGAIYLADTSVYTVQAKHPQVQRRFEQLLAEGRLATCQMTTLEYLNTAPHPRGYEIVWSALHGQRWLDVTTEAMNRALATHRALAATSQHRHFRLPDLIIAATAELNGATVLHYDTDYDRIAAVTGQPVEWVAPRGSL*