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PLM1_60_b1_redo_sep16_scaffold_235_8

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(6627..7277)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Tax=Streptomyces sp. SS RepID=UPI0002DD193F similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 204.0
  • Bit_score: 236
  • Evalue 2.30e-59
RNA polymerase {ECO:0000313|EMBL:KJK59545.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 211.0
  • Bit_score: 245
  • Evalue 6.90e-62
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 205.0
  • Bit_score: 236
  • Evalue 6.40e-60

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Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGTCGATCCAGTCGGCGTTGTGGTCCAGGCCGTACCGGGCTCCGCGGCGCGCGCCGCGGTTCTGGTGGGCATGGCTGTCGCGCGCCGATCCACGGGCGGACAGCGCCTCGCGGGCCGAGCGCCTGCCGCTGCGGCTCCTGCGGCGGCGAAGCGACGACAACCCGTCGCCGACCACCCTCACCGAGCTGTATCACGCGTACCGCCTACCGATGGTCCGCCTTGCCATCCTGCTCGTTGACGACCTACACACGGCCGAAGACGTGGTCCAGGACGCGTTCACGGCGGTCTGCCGGCGGCACGGCGCCAACCTGCGCGGGATCGACGACGCGGGCGCCTACCTGAACACCGCCGTCGTGAACGCCGCCCGCTCGGTCCTGCGACGACGGAGGACGGCCCGCGCATACGTACCGCCGCGCCAGGAGTACGGCCCGCCGATCGACGAGCACGTACTGCTCAAGGAGGAGCACCGCGCTGTTTTCGACGCGTTACAGCACCTGACCCGGCGCCAACGCGAGGTCCTGGTGCTGCGGTACTGGTCCAACCTCTCGGAAATCGAGATCGCCGACGCGCTCAAGCTGTCCCGTGGAGCGGTGAAGTCCACCGCGAGCCGGGCACTGGACACCCTCGAGAAGCTGCTGGAGACCCGTTGA
PROTEIN sequence
Length: 217
MSIQSALWSRPYRAPRRAPRFWWAWLSRADPRADSASRAERLPLRLLRRRSDDNPSPTTLTELYHAYRLPMVRLAILLVDDLHTAEDVVQDAFTAVCRRHGANLRGIDDAGAYLNTAVVNAARSVLRRRRTARAYVPPRQEYGPPIDEHVLLKEEHRAVFDALQHLTRRQREVLVLRYWSNLSEIEIADALKLSRGAVKSTASRALDTLEKLLETR*