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PLM1_60_b1_redo_sep16_scaffold_753_22

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(27985..29931)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase Tax=Amycolatopsis nigrescens RepID=UPI000360A35D similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 648.0
  • Bit_score: 1126
  • Evalue 0.0
DNA ligase {ECO:0000313|EMBL:AJK57521.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 648.0
  • Bit_score: 1118
  • Evalue 0.0
DNA ligase similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 648.0
  • Bit_score: 1118
  • Evalue 0.0

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Taxonomy

Amycolatopsis lurida → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1947
GTGCTGCGTGATGCCTACTACCGGGGTTCGCCGCTGGTGGGGGACGCCGAGTACGACACGATCGAGGAGCGGTTGAGGGGGTTGATCGAGGCGAGCCCGGAGCTGGCGCCTGACCCGAGTCCTCTGGAGCAGGTGGGCGCGCCCGCGGTGCTGCACGCGCCGATCCGGCACTCGCGTCCCATGCTGTCGCTGGAGAAAGCGACCCGGCCCGAGCAGGTCGCCGCGTTCTTCGACCGCTTTCCCGGCCAGCCGGTGGTGGTCATGCCGAAGCTGGACGGGCTGTCGCTGGCGCTGGTTTACCAGGACGGGCGGCTGGCACGGGCGATCACCCGCGGGGACGGGACGACCGGCGATGACGTGACCGTGCTGGTGCGGGCACTGACCGACGGGGTGCCGGGGCGGGTCGAGGCGCCGGGGCGGGTCGAGGTGCGCGGTGAGGCGGTGATGCTGCGTTCCACGTTCGCCGCCTACAACGCCGCGCACCCGGACCGTCCGCTGATCAACCCGCGCGGCGCCGCCGCGGGCACCCTGCGCGCCAAGGACCCGGCCACGGTCGCCGAACGGCGCTTGCAGTTCTTCGCCTTCGACCTGGGCACCGACCCCGACGGCGCCGAGACCGATCTGGACCGCGCCCTGCGGACACTGGGGTTCACCGTCGCCGAGATGCGGCACTGCGCCGACGCGAACGCGGCGCAAGCGGTGATCGCAGCGATCGAGACGCAGCGCAATACCCTGGACTTCGACGTGGACGGCGCGGTGCTGCGGCTGGCCGACCGTGATGCCTACGCGGCCGCCGGGACACGGTCGAGCTCGCCCCGCGGCGCGCTCGCGTTCAAGTTCGCCGCCGAGGAGAAGACGACGGTGCTGTCCGACGTGGTCTGGGACGTCGGCAAGACGGGCAAGATCGCCCCGGTGGCCCGGTTGGAGCCGGTGTTCGTGGGTGGGACGACGGTCACCCGCGCGACGCTGGCCAACCAGGAGGTGATCCGCGCGCGTGGCGTCAGGATCGGGGACACGGTGCTGGTTCGCCGCGCCGGCGACGTGATCCCGTTCGTCGCCGGTGTGCTCGACGCGTCCCAGCGCACGGGCGCGGAGCGGGAGATCGTGCCGCCCACCGCGTGCCCGTCGTGTGCGCATCCGGTGACCGAGCAGGGCAACAGCCGCGAGCTGTTCTGTACCAATGTCGCCTGTCCCGCCCAGACCGTGCGGCGGTTGATTCACTGGGCGTCGCGGGCGGCGGCGGACATCGATGCGATCGGTCAGGTGTGGATCGAACGGCTTGCCGACGCCGGGATCCTGGAGCACCCGTCGGACTTCTACCGGCTGACCAAGGAGCGGTTGCTGGAGTTCGACCGCATCGGCGAGGTCTGGGCCGCGCGCATGATCGAGTCGATCGAGGCCAGCCGCCAGGTCGGGCTGCGCCGGGCGCTGATCGGGCTGGCGATCCCGATGGCCTCGGAGGGCACGGCCGCGCGGCTGTGCCGTGCGGGGTTCGGCTCACTCGAGCAGGTCGCCGACGCAGGCGTCGAAGGACTGGTGGCCGTGGAGGACGTCGGGCCGAAGGTCGCCGCCTCGCTGATAGAGCACCTCAGCCGGCTGGCGCCCGAGCTGCAACGGCTGCGGCAGCGCGGGGTTTCCCTGGACGTGCGTGCAGAGGACCTTCCGCCGGTCGTCGCGGCCGGGGCGCCGCTGGCCGGCAAGACGGTGGTGATTACCGGCGCGATCAGCGACCCGCGCTCGGGCGAGAAGGTTGCCCGCCCCACTTTCCAGCGGCTGTGCGAGAAGGCCGGTGCGACCACTGCGTCGTCGGTCTCGGCGAGCACTGACCTGCTCATCACCGGTGCTGGCGTCGGCGCGAGCAAACTCACCAAAGCCGAGAAACTCGGGGTTGAGGTCGTCGACCAGGGCGAAATCTGGCAACAGCTAATCGCAGCCGGCATCACCTAG
PROTEIN sequence
Length: 649
VLRDAYYRGSPLVGDAEYDTIEERLRGLIEASPELAPDPSPLEQVGAPAVLHAPIRHSRPMLSLEKATRPEQVAAFFDRFPGQPVVVMPKLDGLSLALVYQDGRLARAITRGDGTTGDDVTVLVRALTDGVPGRVEAPGRVEVRGEAVMLRSTFAAYNAAHPDRPLINPRGAAAGTLRAKDPATVAERRLQFFAFDLGTDPDGAETDLDRALRTLGFTVAEMRHCADANAAQAVIAAIETQRNTLDFDVDGAVLRLADRDAYAAAGTRSSSPRGALAFKFAAEEKTTVLSDVVWDVGKTGKIAPVARLEPVFVGGTTVTRATLANQEVIRARGVRIGDTVLVRRAGDVIPFVAGVLDASQRTGAEREIVPPTACPSCAHPVTEQGNSRELFCTNVACPAQTVRRLIHWASRAAADIDAIGQVWIERLADAGILEHPSDFYRLTKERLLEFDRIGEVWAARMIESIEASRQVGLRRALIGLAIPMASEGTAARLCRAGFGSLEQVADAGVEGLVAVEDVGPKVAASLIEHLSRLAPELQRLRQRGVSLDVRAEDLPPVVAAGAPLAGKTVVITGAISDPRSGEKVARPTFQRLCEKAGATTASSVSASTDLLITGAGVGASKLTKAEKLGVEVVDQGEIWQQLIAAGIT*