ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_250_9

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 7962..10076

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein B Tax=Frankia alni (strain ACN14a) RepID=Q0RGY6_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 703.0
  • Bit_score: 1164
  • Evalue 0.0
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 703.0
  • Bit_score: 1164
  • Evalue 0.0
uvrB; excinuclease ABC subunit B similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 703.0
  • Bit_score: 1164
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2115
ATGACGAGGGTCAGGGATGTCATCCGCCGCGACGGGCAGTTCAAGGTCGTCAGCGATTACCAGCCGGCCGGCGATCAGCCTGCCGCTATCGACGAGCTGGAGCGGCGGGTCCGCGCGGGCGATCAGAACGTAGTACTGCTTGGTGCCACCGGTACCGGTAAGTCGGCGACGACCGCGTGGCTGGTGGAGCGGTTGCAGCGGCCGACGCTGGTCATGGCGCCCAACAAGACCCTCGCCGCGCAGCTCGCGAACGAGTTCCGGGAGCTGCTGCCGCACAACGCCGTCGAGTACTTCGTCTCGTACTACGACTACTACCAGCCCGAGGCGTACGTCCCGCAGACCGACACCTACATCGAGAAGGACTCGTCGGTGAACGACGAGGTCGAGCGGCTTCGTCACTCGGCCACGATGAGCCTGCTCACCCGGCGCGACGTTATCGTGGTGGCCTCGGTCTCCTGCATCTACGGCCTGGGCACGCCGCAGGAGTACGTGGACCGCTCGGTCCGGCTGCGGGTCGGCGACGAGTTCGAGCGGGACAAGCTGCTCCGGCGGCTCGTCGACATCCAGTACACCCGCAACGACCTGGCCTTCGCCCGCGGCACGTTCCGGGTACGCGGCGACACCATCGAGGTCTTCCCCGCGTATGAGGAGCTGGCCGTCCGGATCGAGATGTTCGGCGACGAGGTCGAGCGGCTGTACTACCTCCACCCGCTCACCGGCGAGGTCGTCAAGGAGACCGACGGCCTCATGGTCTTCCCGGCCACCCACTACGTCGCCGGCCCGGAGCGCATGGAGAAAGCGATCCGGGGCATCGAGTCCGAGATGGAGGAGCGCCTCGCCGAACTCGACCGCCAGGGCAAGCTGCTGGAGGCCCAGCGGCTGCGGATGCGCACCGCCTACGACATCGAGATGATGCGCCAGGTCGGGTTCTGCTCCGGTATCGAGAACTACTCCCGGCACATCGACGACCGCACGGCCGGGTCGGCGCCGAACTGCCTGATCGATTACTTCCCGGAAGACTTCCTGCTGGTCGTGGACGAGTCGCACGTCACGATCCCGCAGGTCGGCGGCATGTACGAGGGCGACATGAGCCGCAAGCGGACCCTGGTCGAGCACGGTTTCCGGCTGCCGAGCGCGATGGACAACCGCCCGCTGAAGTTCGAGGAGTTCCTCGACCGGATCGGCCAGACCGTCTACCTCTCGGCCACGCCCGGCCCGTACGAACTGGAGCGCGCGCAGGGCGAGTTCGTCGAGCAGGTCATCCGCCCGACCGGCCTCGTCGACCCCGAGGTCGTCGTCAAGCCAACCAAGGGCCAGATCGACGACCTCGTCCACGAGATCCGCACCAGGGCCGAGAAGGACGAGCGGGTGCTGGTCACGACGCTCACCAAGAAGATGTCCGAGGACCTCACCGACTACCTCCTCGAACTCGGCATCCGGGTCCGGTACCTGCACTCCGAGGTCGACACGCTGCGCCGGGTTGAGCTGCTGAAGGAGCTGCGCAAGGGCGACTACGACGTACTCGTCGGCATCAACCTGCTGCGTGAGGGCCTTGACCTGCCCGAGGTGTCGCTGGTGAGCATCCTCGATGCCGACAAGGAAGGCTTCCTGCGCAGCGGCACCTCGCTGATCCAGACGATCGGCCGCGCCGCCCGTAACGTCTCCGGCCAGGTCCACATGTACGCCGACCAGATCACGCCGTCGATGGCCAAGGCAATCGACGAGACCAACCGCCGTCGGGCGAAGCAGATCGCATACAACACCGAGATGGGCGTCGACCCGCAGCCGCTACGGAAGAAGATCGTCGACATCCTCGATGACATCTACCGCGAAGCCGCCGAGAACGAAGGCGATCTGCTCGGTGGTTCTGGCCGGCAGCAGAGCCGTGGCAAGGCGCCGGTGCCGGGCCTGTCGTCGCGGAAGGCCGCCGGTCCTGCGGCGGCGCGGCGCGACGGCATGCCGCGTGCGGAGCTGGCCGACCTGATCCAGCAGCTCAACGACCAGATGCTCGCCGCCGCACGGGAACTCCAGTTCGAGCTTGCCGCGCGCCTGCGGGACGAGATCAAGGAGCTCAAGAAGGAGCTGCGCGGCATGGACGCGGCGGGCGTGAAGTAG
PROTEIN sequence
Length: 705
MTRVRDVIRRDGQFKVVSDYQPAGDQPAAIDELERRVRAGDQNVVLLGATGTGKSATTAWLVERLQRPTLVMAPNKTLAAQLANEFRELLPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSVNDEVERLRHSATMSLLTRRDVIVVASVSCIYGLGTPQEYVDRSVRLRVGDEFERDKLLRRLVDIQYTRNDLAFARGTFRVRGDTIEVFPAYEELAVRIEMFGDEVERLYYLHPLTGEVVKETDGLMVFPATHYVAGPERMEKAIRGIESEMEERLAELDRQGKLLEAQRLRMRTAYDIEMMRQVGFCSGIENYSRHIDDRTAGSAPNCLIDYFPEDFLLVVDESHVTIPQVGGMYEGDMSRKRTLVEHGFRLPSAMDNRPLKFEEFLDRIGQTVYLSATPGPYELERAQGEFVEQVIRPTGLVDPEVVVKPTKGQIDDLVHEIRTRAEKDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSEVDTLRRVELLKELRKGDYDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSGTSLIQTIGRAARNVSGQVHMYADQITPSMAKAIDETNRRRAKQIAYNTEMGVDPQPLRKKIVDILDDIYREAAENEGDLLGGSGRQQSRGKAPVPGLSSRKAAGPAAARRDGMPRAELADLIQQLNDQMLAAARELQFELAARLRDEIKELKKELRGMDAAGVK*