ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_201_16

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 12742..13254

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Longispora albida RepID=UPI0003687E50 similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 155.0
  • Bit_score: 183
  • Evalue 1.80e-43
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 155.0
  • Bit_score: 181
  • Evalue 1.10e-43
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB46177.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 155.0
  • Bit_score: 181
  • Evalue 5.60e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGCGGGAGCCGGAGGGGTTTCGTGAGTTCGTGGCGACGCGGTCGCCGGCCCTTCTGCGCGCGGCGTGGCTCCTGACTGGCAATCACGCGACCGCTCAGGACTTGGTACAGACGACCCTGGCCCGGATGTGGACCCGGTGGGGGCGGTTGGAGCGTGCCGGCAGTGCCGAGTCTTACGCCCGGCGGATCATGATCAGCATTTATGCGACGTGGTGGCGGCGGCGGTGGCGGGCTGAGGTATCCACGGCGTTCCTGCCGGACCGTTCGGTCGTGGAGGACGACTTTGCAGCGGTGGATCTTCGTGAAGCACTCCGCCGCGCGCTGGACGAGCTCCCCCGCCGCCAACGCGCCGTGATCGTGCTGCGGTACTTCGAGGACCTCACCGAGGCGCAGACCGCGGCGGCGTTGGGCTGCTCGGTCGGGACGGTGAAGAGCCAAGCCTCCAAGGCCCTGGCCAGGCTGCGTCGACATGACTGGTCAGGCACGGCCAGCAGCGAGGAGGCCCGGGAGTGA
PROTEIN sequence
Length: 171
VREPEGFREFVATRSPALLRAAWLLTGNHATAQDLVQTTLARMWTRWGRLERAGSAESYARRIMISIYATWWRRRWRAEVSTAFLPDRSVVEDDFAAVDLREALRRALDELPRRQRAVIVLRYFEDLTEAQTAAALGCSVGTVKSQASKALARLRRHDWSGTASSEEARE*